| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4178 |
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| Symbol | |
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| ID | 6113147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4603528 |
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| End bp | 4604730 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641623972 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_001751027 |
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| Protein GI | 170723339 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.363514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACCT TTCGCTACCA GGCCGTTGAT CTGGCCGGCA AGACCCACAA AGCCAGCCTG
CAAGCCGATA CCGAACGCCA CGCACGTCAG TTGCTGCGCG AGCAGGGGCT GTTCCCTCGC
CAGTTGCAGC GCTTCGAAAG CGGTGCCCGG CAGCCTCGCC GACAACGCTT GAGCCGTGCC
CAGCTGTGTG AGCTGACACG CCAGCTGGCG ACTTTGACCG GCGCGGGCAT CCCGCTGGTC
GATGCCTTGG CGACGCTTGA GCGCCAGTTG CGCCAGCCAG CCCTGCACGG GGTGCTGGTG
GCTCTGCGTG GCTCGCTCGC CGAGGGCCTG GGCCTGGCCC GCAGCCTGGC CCGCCAGGGC
GCGCCTTTCA CCGGCCTGTA CTGCGCGCTG GTCGAAGCCG GTGAGCGCTC CGGGCGGTTG
GCCCAGGTGC TTACCCGGCT GGCAGACCAC CTGGAACAGG TGCAGCGCCA GCAGCACAAG
GCGCGCACGG CACTGATCTA CCCCTGCGTG CTGATGGGCG TGTCACTGGC GGTGGTGATC
GGCCTGATGA CCTTCGTCGT ACCCAAGCTC ACCGAACAGT TTGCCCATGC CGGGCAGAGC
CTGCCGCTGA TCACCTCATT ACTTATCGGC CTGAGCCAAG GCTTGGTGCA CGCCGGTCCC
TGGTTGCTGG GGCTGGCGAT CCTGACGTCG CTGCTGGCCA GCTGGTTGCT GCGCAAGCCG
CACTGGTGCC TGCGCCGCGA CGACCTGCTG TTGCGCCTGC CGCGCGTGGG GGGCCTGTTG
CAGGTGCTGG AGAGTGCCCG CCTGGCGCGC AGCCTGGCGA TCCTCACCAG CAGCGGTGTT
GCCTTGCTCG AAGCCTTGCA GGTGGCCACT GAAACCGTCG GCAACCGGCG CATTCGCCTG
GCCATGGAGC AGGTGCGCCA GCAGGTGCAG GGCGGCACCA GCCTGCACAG GGCGCTGGAT
GGTTGCCAGC AGTTCCCGCC GTTGCTGGTG AACATGGTCG GCAGTGGCGA GGCCAGCGGC
ACCCTGGCCG ACATGCTCGA GCGCGTGGCC GACGACCAGG AGCGTGGCTT TGCGCGCCAG
GTGGATACGG CCATGGCGCT TTTCGAACCC CTGATGATCC TGGTGATGGG CGCCGTAGTG
CTGTTCATCG TGCTGGCGGT GCTGCTGCCG ATCATGCAAC TCAACCAGGG CCTGCAACTG
TAG
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| Protein sequence | MPTFRYQAVD LAGKTHKASL QADTERHARQ LLREQGLFPR QLQRFESGAR QPRRQRLSRA
QLCELTRQLA TLTGAGIPLV DALATLERQL RQPALHGVLV ALRGSLAEGL GLARSLARQG
APFTGLYCAL VEAGERSGRL AQVLTRLADH LEQVQRQQHK ARTALIYPCV LMGVSLAVVI
GLMTFVVPKL TEQFAHAGQS LPLITSLLIG LSQGLVHAGP WLLGLAILTS LLASWLLRKP
HWCLRRDDLL LRLPRVGGLL QVLESARLAR SLAILTSSGV ALLEALQVAT ETVGNRRIRL
AMEQVRQQVQ GGTSLHRALD GCQQFPPLLV NMVGSGEASG TLADMLERVA DDQERGFARQ
VDTAMALFEP LMILVMGAVV LFIVLAVLLP IMQLNQGLQL
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