Gene PputW619_4159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4159 
Symbol 
ID6113128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4585025 
End bp4585834 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content62% 
IMG OID641623953 
Productcytochrome c assembly protein 
Protein accessionYP_001751008 
Protein GI170723320 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.25819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.436154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTCCT CACCCAGCCT CATCCCCAAC CTGATCGCCG CCGGCCTATA TATAGCAGCG 
ACCGTTTATC AGGGTTCGCG CCTGGCCCAG TCGAGCAAAG CCGACAAACG GCTGCTCGGC
CTGCTCGGCG CCCTCGCCGT GATCGCCCAG AGCGGCGCGC TTTTCTTTCA GCTGATCACT
CCGCTGGGCC TGAGCCTGGA CTTCTTCAGC GCCGCCAGCC TGATCGCCGT GGCGGTGATC
ACCCTGACCC TGCTGGCCTG CCTGCGCATA CCGGTGGAAA ACCTGCTGGT CCTGCTGTTC
CCGCTCGGCG CCATCACGGC CCTGCTGGCC CAGTTCGCCC CACCCGGCAC CGTTCCGCTG
ATCGATGAAG AGCCGGGGAT CCTCGCTCAT ATCCTGCTAT CGATCCTGGC CTATGGGCTG
TTCACCATTG CGGTGTTCCA GTCACTGCTC CTGCTATTGC AGGACCACCA ACTGAAAAAC
AAGCACCCTT CCGGCCTGAT CCGCAACTTC CCACCGTTGC AGACCATGGA AAGCCTGCTG
TTCGGCTTCC TTTGGGCGGG CTGGTGCCTG TTGTCGCTGT CGCTGATCTC TGGCTGGCTG
TTCCTGGACA ACCTGTTTGC CCAGCACCTG GTACACAAAA CCCTGCTGGC CTGCGTGGCC
TGGATCGTCT TCAGCGTACT GCTGTGGGGC CGCACCCGGC TGGGCTGGCG TGGCCACAAG
GCGATCCGCT GGACACTGGC CGGTTTCTGC CTGCTGATGC TGGCCTATTT CGGCAGCAAG
CTGGTCCGCG AATTCATCCT GCATATCTGA
 
Protein sequence
MVSSPSLIPN LIAAGLYIAA TVYQGSRLAQ SSKADKRLLG LLGALAVIAQ SGALFFQLIT 
PLGLSLDFFS AASLIAVAVI TLTLLACLRI PVENLLVLLF PLGAITALLA QFAPPGTVPL
IDEEPGILAH ILLSILAYGL FTIAVFQSLL LLLQDHQLKN KHPSGLIRNF PPLQTMESLL
FGFLWAGWCL LSLSLISGWL FLDNLFAQHL VHKTLLACVA WIVFSVLLWG RTRLGWRGHK
AIRWTLAGFC LLMLAYFGSK LVREFILHI