Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4159 |
Symbol | |
ID | 6113128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4585025 |
End bp | 4585834 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641623953 |
Product | cytochrome c assembly protein |
Protein accession | YP_001751008 |
Protein GI | 170723320 |
COG category | [R] General function prediction only |
COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.25819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.436154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTCCT CACCCAGCCT CATCCCCAAC CTGATCGCCG CCGGCCTATA TATAGCAGCG ACCGTTTATC AGGGTTCGCG CCTGGCCCAG TCGAGCAAAG CCGACAAACG GCTGCTCGGC CTGCTCGGCG CCCTCGCCGT GATCGCCCAG AGCGGCGCGC TTTTCTTTCA GCTGATCACT CCGCTGGGCC TGAGCCTGGA CTTCTTCAGC GCCGCCAGCC TGATCGCCGT GGCGGTGATC ACCCTGACCC TGCTGGCCTG CCTGCGCATA CCGGTGGAAA ACCTGCTGGT CCTGCTGTTC CCGCTCGGCG CCATCACGGC CCTGCTGGCC CAGTTCGCCC CACCCGGCAC CGTTCCGCTG ATCGATGAAG AGCCGGGGAT CCTCGCTCAT ATCCTGCTAT CGATCCTGGC CTATGGGCTG TTCACCATTG CGGTGTTCCA GTCACTGCTC CTGCTATTGC AGGACCACCA ACTGAAAAAC AAGCACCCTT CCGGCCTGAT CCGCAACTTC CCACCGTTGC AGACCATGGA AAGCCTGCTG TTCGGCTTCC TTTGGGCGGG CTGGTGCCTG TTGTCGCTGT CGCTGATCTC TGGCTGGCTG TTCCTGGACA ACCTGTTTGC CCAGCACCTG GTACACAAAA CCCTGCTGGC CTGCGTGGCC TGGATCGTCT TCAGCGTACT GCTGTGGGGC CGCACCCGGC TGGGCTGGCG TGGCCACAAG GCGATCCGCT GGACACTGGC CGGTTTCTGC CTGCTGATGC TGGCCTATTT CGGCAGCAAG CTGGTCCGCG AATTCATCCT GCATATCTGA
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Protein sequence | MVSSPSLIPN LIAAGLYIAA TVYQGSRLAQ SSKADKRLLG LLGALAVIAQ SGALFFQLIT PLGLSLDFFS AASLIAVAVI TLTLLACLRI PVENLLVLLF PLGAITALLA QFAPPGTVPL IDEEPGILAH ILLSILAYGL FTIAVFQSLL LLLQDHQLKN KHPSGLIRNF PPLQTMESLL FGFLWAGWCL LSLSLISGWL FLDNLFAQHL VHKTLLACVA WIVFSVLLWG RTRLGWRGHK AIRWTLAGFC LLMLAYFGSK LVREFILHI
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