| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4157 |
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| Symbol | rpsP |
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| ID | 6113126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4582866 |
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| End bp | 4583117 |
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| Gene Length | 252 bp |
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| Protein Length | 83 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641623951 |
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| Product | 30S ribosomal protein S16 |
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| Protein accession | YP_001751006 |
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| Protein GI | 170723318 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0228] Ribosomal protein S16 |
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| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.29802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.39086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTAACCA TCCGTCTTGC CCGTGGCGGC TCGAAAAAGC GCCCTTTCTA CCACCTGACC
GTGACCAACT CGCGTAACGC CCGTGACGGC CGTTTCGTTG AGCGCGTAGG TTTCTTCAAC
CCGATCGCTG CTGGCGCTGA AGTCAAGCTG TCGGTCAACC AGGAGCGCGT CAGCTACTGG
CTGAGCCAAG GCGCACAGCC GTCTGAGCGT GTTGCTCAGC TGCTGAAGGA CGCTGCCAAG
GCCGCTGCCT GA
|
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| Protein sequence | MVTIRLARGG SKKRPFYHLT VTNSRNARDG RFVERVGFFN PIAAGAEVKL SVNQERVSYW
LSQGAQPSER VAQLLKDAAK AAA
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