Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4149 |
Symbol | |
ID | 6113118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4575576 |
End bp | 4576880 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641623943 |
Product | homoserine dehydrogenase |
Protein accession | YP_001750998 |
Protein GI | 170723310 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.490184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.418936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACCGG TCAAAGTAGG CATCTGTGGG TTGGGGACCG TCGGTGGCGG TACCTTCAAT GTACTTCAGC GCAACGCCGA GGAGATTGCC CGCCGTGCCG GGCGCGGTAT TGAAGTGGCA CAGATCGCCA TGCGCTCGCC TAACCCGAAC TGCCAGATTA CCGGTACCCC CATTACCGCT GATGTGTTCG ACGTTGCGAG CAACCCGGAG ATCGACATTG TCATCGAGCT GATCGGTGGA TACACCATCG CTCGCGACCT GGTGCTCAAG GCCATCGAAA ACGGCAAGCA CGTGGTGACT GCCAACAAGG CGCTGATCGC CGTACACGGC AACGAAATCT TCGCCAAGGC CCGTGAGAAG GGCGTGATCG TTGCGTTCGA AGCCGCAGTG GCAGGTGGCA TCCCGGTGAT CAAGGCGATC CGCGAAGGCC TGTCGGCCAA CCGTATCAAC TGGCTGGCCG GGATCATCAA CGGCACAGGC AACTTCATTC TCACCGAAAT GCGTGAAAAA GGCCGGGCCT TCCCCGATGT GCTGGCCGAA GCCCAGGCGC TGGGTTATGC CGAAGCCGAC CCGACTTTCG ACGTCGAAGG TATCGATGCT GCGCACAAGC TGACCATCCT GGCGTCCATC GCCTTTGGTA TCCCGCTGCA GTTCGACAAG GCCTACACCG AAGGCATCAC CCAGCTGACC ACTGCCGACG TGAACTACGC CGAAGCCCTG GGCTACCGCA TCAAGCACCT GGGTGTGGCC CGTCGCACTG CAGAAGGCAT CGAGCTGCGC GTGCACCCGA CGCTGATCCC GAGCGATCGC CTGATCGCCA ACGTCAATGG CGTGATGAAC GCCGTGATGG TCAATGGCGA TGCGGCAGGC TCCACCCTTT ACTACGGCGC AGGCGCCGGC ATGGAGCCCA CCGCTTCCTC GGTGGTCGCC GACCTGGTCG ACGTGGTCCG CGCCATGACC TCCGACCCTG AAAACCGCGT GCCGCACCTG GCCTTCCAGC CGGATTCGCT GTCGGCGCAC CCGATCCTGC CGATCGAAGC CTGCCAGAGC GCCTACTACC TGCGTATCCA TGCCAAGGAT CACCCAGGCG TGCTGGCTCA GGTGGCGAGC ATCCTGTCGG AGCGCGGCAT CAACATCGAG TCGATCATGC AGAAAGAAGT CGAGGAACAG GACGGCCTGG TGCCGATGAT CCTGCTGACC CACCGTGTGG TCGAGCAGAG CATCAACGAC GCCATCGTTG CTCTTGAAGC CTTGCAGGAC GTGGTCGGCA AGGTCGTGCG CATCCGCGTC GAACAGCTCA ACTAA
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Protein sequence | MKPVKVGICG LGTVGGGTFN VLQRNAEEIA RRAGRGIEVA QIAMRSPNPN CQITGTPITA DVFDVASNPE IDIVIELIGG YTIARDLVLK AIENGKHVVT ANKALIAVHG NEIFAKAREK GVIVAFEAAV AGGIPVIKAI REGLSANRIN WLAGIINGTG NFILTEMREK GRAFPDVLAE AQALGYAEAD PTFDVEGIDA AHKLTILASI AFGIPLQFDK AYTEGITQLT TADVNYAEAL GYRIKHLGVA RRTAEGIELR VHPTLIPSDR LIANVNGVMN AVMVNGDAAG STLYYGAGAG MEPTASSVVA DLVDVVRAMT SDPENRVPHL AFQPDSLSAH PILPIEACQS AYYLRIHAKD HPGVLAQVAS ILSERGINIE SIMQKEVEEQ DGLVPMILLT HRVVEQSIND AIVALEALQD VVGKVVRIRV EQLN
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