| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4142 |
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| Symbol | |
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| ID | 6113111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4568515 |
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| End bp | 4570224 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641623936 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_001750991 |
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| Protein GI | 170723303 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.810057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATCG AACCCCGCCC GCTGCCGCCG ACCCTGCCGT TTCTCGGTAA CCTGCCACCC
TTGCTGACCC GCTTGTATGC CGCCCGCGGC GTGCAGTCCG AGGCCGAGCT GGACAAGAGC
CTGGCGCGGC TGTTGCCGTA CCAGCAGCTC AAGGGCATCG ATGCCGCTGT AGACTTGCTG
GTCGAAGCGC TCGACCAGCG CCAGCGCATC ATCATCGTCG GCGACTTCGA TGCCGACGGC
GCCACCGCCA GTACTGTCGG CGTGCTCGGC CTGCGCCTGC TGGGTGCGGC CCATGTCGAC
TACCTGGTGC CCAACCGTTT CGAATATGGC TATGGCCTGA CCCCGGAGAT CGTCGAGGTG
GCGCTGCAGC GCCAGCCGCA ATTGCTGATC ACGGTCGACA ACGGCATTTC CAGTGTCGAG
GGTGTGGCGG CAGCCAAAGC GGCCGGGCTC AAAGTGCTGG TCACCGACCA CCACCTGCCG
GGCCAGCAAT TGCCGGTTGC CGACGCCATC GTCAACCCGA ACCAACCAGG TTGCGACTTC
CCGAGCAAGT CGTTGGCCGG TGTCGGGGTG ATCTTCTACG TGCTGATGGC CTTGCGCGCA
CGCCTGCGTA GCCTGGGGCG ATATGAAACC CAGGCACAAC CGAACATCGG CGAACTGCTC
GACCTGGTCG CGCTGGGCAG CGTAGCCGAC GTGGTACCGC TGGATGCCAA TAACCGCATC
CTCGTGCATC AGGGCCTGGA GCGCATCCGT GCCGGCAGGG CGCGGCCGGG GCTGAAGGCG
ATTCTGGAGG TGGCACGTCG CGATCACCGG CGCATCACCT CCACTGACCT GGGTTTCATT
CTAGGCCCGC GGCTCAATGC CGCCGGGCGC CTGGACGACA TGAGCCTGGG TATCGAGTGC
CTGTTGTGCG AGGACGAGGC GCTGGCCCTG GACATGGCAC AGCAGCTCGA CGGCCTGAAC
CAGGACCGCA AGTCGATCGA GCAGGGCATG CAGCGCGAAG CCTTGGCCCA GCTCAAGGAT
TTGCCGGTCG AGTCCATGCC TTACGGCCTA TGCCTGTTCG ATGCCGAATG GCACCAGGGC
GTGATCGGTA TTCTCGCCTC GCGCCTGAAG GAGCGTTACC ACCGCCCGAC CATCGCCTTC
GCCGATGCCG GTGAGGGCAT GCTCAAGGGC TCGGCGCGGT CGGTACCGGG CTTTCACATC
CGTGATGCGC TGGATGCAGT GGCAGCGCGC CATCCGCAGT TGATCAGCAA GTTTGGCGGC
CATGCCATGG CCGCGGGCCT GTCGCTACCT GAAGGCAATT TCCCCGCGTT TGCCGAGGCG
TTCGACGAAG AAGTGCGGCG CCAGCTGCGT GAAGAAGACC TCACCGGGCG CCTGCTGTCG
GATGGAAGCC TGGCGGTGGA GGAGTTCCAC CTTGACCTGG CCAAGGCCTT GCGCCACGCC
GGGCCCTGGG GGCAGCACTT CCCCGAACCG TTGTTCCATG GTGTGTTCCA GTTGGTGGAG
CAGCGTGTGG TCGGCGAGCG CCACCTTAAA GTGGTGCTCA AGAGCGAATG TGGTTCGGTA
CGCCTGGATG GCATTGCCTT CGGCATCGAC CGCGAGGTTT GGCCGAACCC GACCGTGCGT
TGGGTGGAGC TTGCCTACAA GCTGGATGTT AACGAGTTTC GAGGTAATGA AAGTGTGCAG
TTGATGATTG CGCATATGGA GCCGCGCTGA
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| Protein sequence | MRIEPRPLPP TLPFLGNLPP LLTRLYAARG VQSEAELDKS LARLLPYQQL KGIDAAVDLL
VEALDQRQRI IIVGDFDADG ATASTVGVLG LRLLGAAHVD YLVPNRFEYG YGLTPEIVEV
ALQRQPQLLI TVDNGISSVE GVAAAKAAGL KVLVTDHHLP GQQLPVADAI VNPNQPGCDF
PSKSLAGVGV IFYVLMALRA RLRSLGRYET QAQPNIGELL DLVALGSVAD VVPLDANNRI
LVHQGLERIR AGRARPGLKA ILEVARRDHR RITSTDLGFI LGPRLNAAGR LDDMSLGIEC
LLCEDEALAL DMAQQLDGLN QDRKSIEQGM QREALAQLKD LPVESMPYGL CLFDAEWHQG
VIGILASRLK ERYHRPTIAF ADAGEGMLKG SARSVPGFHI RDALDAVAAR HPQLISKFGG
HAMAAGLSLP EGNFPAFAEA FDEEVRRQLR EEDLTGRLLS DGSLAVEEFH LDLAKALRHA
GPWGQHFPEP LFHGVFQLVE QRVVGERHLK VVLKSECGSV RLDGIAFGID REVWPNPTVR
WVELAYKLDV NEFRGNESVQ LMIAHMEPR
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