Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4133 |
Symbol | |
ID | 6113102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4561423 |
End bp | 4562463 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641623927 |
Product | spermidine/putrescine ABC transporter ATPase subunit |
Protein accession | YP_001750982 |
Protein GI | 170723294 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTAG CCGTCCAGTT CACCCAGGTG TCACGCACCT TCGGCGAGGT CAAGGCCGTT GACCAGGTCA GCATCGACAT CATCGATGGG GAGTTCTTTT CGATGCTCGG CCCTTCAGGC TCGGGCAAGA CCACCTGCCT GCGCCTTATA GCCGGTTTCG AGCAGCCGGA CAGCGGCTCG ATCCGCATCC ATGGCGTCGA AGCCGCTGGC GTGCCGCCTT ACCAGCGCGA CGTCAACACC GTTTTCCAGG ACTACGCACT GTTCCCGCAC ATGAACGTGC GCGACAACAT CGCCTACGGG CTGAAGGTCA AAGGCATAGC CAAGGCCGAA CGCCATGCGC GCGCCGAAGA AGCCCTGGCT ATGGTGGCCC TGGCAGGCTA TGGGGAGCGC AAACCGGCAC AACTTTCCGG AGGCCAGCGC CAGCGCGTGG CCCTGGCCCG CGCCTTGGTC AATCGGCCGC GGGTGCTGCT GCTCGACGAG CCGCTCGGCG CCCTCGACCT GAAACTGCGC GAACAGATGC AGGGCGAATT GAAAAAGCTG CAGCGCCAGT TGGGTATCAC CTTCATTTTC GTCACCCATG ACCAGACAGA AGCGCTGTCG ATGTCAGACC GGGTGGCGGT GTTCAACCGC GGCCGCATCG AACAAGTCGA TGCACCGCGC AATCTGTACA TGAAACCGGC TACCACCTTC GTCGCCGAGT TTGTCGGCAC CTCCAACGTA GTACGCGGCG ATCTGGCCCA ACACCTCAGC GGCAGCCGCA CGCCCTTCTC CATTCGCCCC GAGCATATTC GCCTGCTCGG CCAGCCCGAG GCCAGCCACG ATGTACAGGT CAGCGGCCTG CTGCGCGACA TCCAGTACCA GGGCAGTGCC ACCCGCTATG AAGTGCAGCT GGACAGCGGC CAATTGCTGG CGGTCAGCCA GGCCAACGAC CGCTGGCACG AGCAGCCACA AGACTGGCGG CCCGGCCAAC GGGTGCAGGC ACACTGGCCG CGTGAAGCGA TGACGGTACT GCAGGAAACT GTCCTGACCG AGGGCCAGTG A
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Protein sequence | MPLAVQFTQV SRTFGEVKAV DQVSIDIIDG EFFSMLGPSG SGKTTCLRLI AGFEQPDSGS IRIHGVEAAG VPPYQRDVNT VFQDYALFPH MNVRDNIAYG LKVKGIAKAE RHARAEEALA MVALAGYGER KPAQLSGGQR QRVALARALV NRPRVLLLDE PLGALDLKLR EQMQGELKKL QRQLGITFIF VTHDQTEALS MSDRVAVFNR GRIEQVDAPR NLYMKPATTF VAEFVGTSNV VRGDLAQHLS GSRTPFSIRP EHIRLLGQPE ASHDVQVSGL LRDIQYQGSA TRYEVQLDSG QLLAVSQAND RWHEQPQDWR PGQRVQAHWP REAMTVLQET VLTEGQ
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