| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4124 |
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| Symbol | |
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| ID | 6113093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4550768 |
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| End bp | 4551772 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641623918 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001750973 |
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| Protein GI | 170723285 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.113929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGATC TACCGATCGA AGGGTTTGCG ACCGCCAATG AAAATTCGGC GATGGTCTTG
CTGGTCGACG ATCAGGCGAT GATCGGTGAA GCGGTGCGTC GTGGCCTGGC CCACGAGGAG
AATATCGATT TCCATTTCTG CGCCGACCCC CATCAGGCCG TGGCCCAGGC CATGCGCATC
AAACCCACGG TGATCCTCCA GGACCTGATC ATGCCGGGCC TCGACGGCCT TACCCTGGTG
CGCGAATACC GCAACAATCC GGCTACCCGG GACATCCCGA TCATCGTTCT GTCGACCAAG
GAAGACCCTT TGGTCAAGAG TGCGGCCTTC GCTGCCGGAG CCAACGACTA CCTGGTCAAG
CTGCCGGACA CCATCGAACT GGTGGCCCGC ATCCGCTACC ACTCCCGCTC TTACTTGACC
CTGCTGCAGC GTGACGAGGC CTACCGGGCG CTGCGCGTGA GCCAGCAGCA ACTGCTCGAC
ACCAACCTGA TGCTGCAGCG GCTGATGAAC TCCGATGGCC TCACGGGTCT GTCCAACCGC
CGCCATTTCG ATGAGTACCT TGAACTGGAG TGGCGCCGGG CCATGCGTGA GCAGCAGCAA
CTGTCGCTGC TGATGATCGA TGTCGACTAC TTCAAGGTCT ACAACGACAG CTTCGGGCAC
CTGGCGGGTG ATGAGGCGCT GCGCAAGGTT GCAGAGGCCA TTCGCGGCTC TTGTTCGAGG
CCTACCGACC TGCCGGCGCG CTACGGTGGC GAGGAATTCG CGCTGGTATT GCCCAACACC
TCCCCGGGCG GTGCGCGGCT GGTCGCAGAG AAGCTGCGCC AGACCGTACA TGGCCTGAAT
ATCCCGCATA CCGCGCCGCA AGACGATTCG CGACTGACCG TGAGCATCGG CCTGGCGACC
CAGACGCCGG CGATCGGCAG CCATTGCCGG CAGCTTATAT CCGCTGCCGA CAAGGGCTTG
TACCTGGCCA AGAACAGTGG TCGGAACACA GTGGGTATCG CATGA
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| Protein sequence | MIDLPIEGFA TANENSAMVL LVDDQAMIGE AVRRGLAHEE NIDFHFCADP HQAVAQAMRI
KPTVILQDLI MPGLDGLTLV REYRNNPATR DIPIIVLSTK EDPLVKSAAF AAGANDYLVK
LPDTIELVAR IRYHSRSYLT LLQRDEAYRA LRVSQQQLLD TNLMLQRLMN SDGLTGLSNR
RHFDEYLELE WRRAMREQQQ LSLLMIDVDY FKVYNDSFGH LAGDEALRKV AEAIRGSCSR
PTDLPARYGG EEFALVLPNT SPGGARLVAE KLRQTVHGLN IPHTAPQDDS RLTVSIGLAT
QTPAIGSHCR QLISAADKGL YLAKNSGRNT VGIA
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