| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4120 |
|---|
| Symbol | |
|---|
| ID | 6113089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4546586 |
|---|
| End bp | 4547290 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641623914 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001750969 |
|---|
| Protein GI | 170723281 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCAGC AAGGCGCCGC CGGCATTGCC ACCGCCGTCG CCGAAAGCGT GCAATACCAG
GGTCGCAAGA CCGCTCGCCA AGGCAGCGAA CAGCGCCGCC AGCTGATCCT CGACGCCGCC
ATGCGCATTG TCGTGCGTGA TGGTGTGCGT GGTGTGCGCC ACCGTGCGGT CGCCGCCGAG
GCCGGTGTGC CGCTGTCGGC CACGACCTAC TACTTCAAGG ATATCGAGGA CCTGCTCACC
GATACCTTCG CCCAGTACGT CGAACGCAGT GCCGCCTACA TGGCCAAGCT GTGGGCCAAT
ACCGAAGTGG TGCTGCGCCA GCTACTTGCC CAGGGTGATG GCAGTGCGCA ATCAAGGGCG
CGTCTGGCTG ACGAAGTGGC GCAGATGACT GCCGACTACG TTTCCCGTCA GTTGGCCAAC
CGCCGCGACT TCCTGATGGC CGAGCAGGCC TTCCGCCAGG AGGCTCTGCT GTGCCCGCGC
CTGGCCGAGT TGGTGTGCGC CCACGAGCAG ATTCTGCTGC ATGGCACGCG CCAGCTGTTG
CATGTGGTCG GTTCGCAGCA ACCGGAACAG GACGCCCAGA TGTTGACGGC GATTATCGAG
CAGATGGAAT ATCAGGGCCT GCTCAAGGAT GCCGATGCGC AAGCCGATGG GCAGATGCTC
GCTATGCTTA CCCGTTACCT GCACCTGGTG CTGGCATCGG CCTGA
|
|---|
| Protein sequence | MAQQGAAGIA TAVAESVQYQ GRKTARQGSE QRRQLILDAA MRIVVRDGVR GVRHRAVAAE
AGVPLSATTY YFKDIEDLLT DTFAQYVERS AAYMAKLWAN TEVVLRQLLA QGDGSAQSRA
RLADEVAQMT ADYVSRQLAN RRDFLMAEQA FRQEALLCPR LAELVCAHEQ ILLHGTRQLL
HVVGSQQPEQ DAQMLTAIIE QMEYQGLLKD ADAQADGQML AMLTRYLHLV LASA
|
|---|
| |