Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4079 |
Symbol | frr |
ID | 6113048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4503595 |
End bp | 4504152 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641623873 |
Product | ribosome recycling factor |
Protein accession | YP_001750928 |
Protein GI | 170723240 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0233] Ribosome recycling factor |
TIGRFAM ID | [TIGR00496] ribosome recycling factor |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.330007 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAACG ACATCAAGAA AGACGCTCAG GATCGCATGG GCAAGTCCAT CGAGGCTTTG GGCCGCAACC TGGCGTCAAT CCGCACCGGT CGCGCCCACC CAAGCATCCT GGACAGCGTC AAGGTTCCGG CGTGGGGCAG CGAAATGCCG CTGAACCAGG TCGCTGCAGT CTCTGTTGAA GATGCGCGCA CCCTGAAGAT CGTCGCCCAC GACAAGAACC TCAGCGCTGC CATCGAGAAG GCCATCCTGA CTTCCGATCT GGGCCTTAAC CCGTCCAGCG CCGGCACCAC CATCCGTGTA CCGATGCCGG CCCTGACCGA GGAAACCCGC AAGGGTTACA CCAAGCAGGC CAGCGCCGTT GCCGAAGATG CCAAGGTTGC CGTGCGCAAC GTGCGTCGTG ATGCCCTGGC CGACCTGAAG AAGCTCACCA AGGACAAGGA AATCAGTGAA GACGAAGAGC GTCGTGCTGC TGACGAGATC CAGAAGCTGA CCGACAAGTT CGTCGCCGAA ATCGACGCTG CGTTCAAAGC CAAGGAAAAG GACCTGTTGG CCGTCTAA
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Protein sequence | MINDIKKDAQ DRMGKSIEAL GRNLASIRTG RAHPSILDSV KVPAWGSEMP LNQVAAVSVE DARTLKIVAH DKNLSAAIEK AILTSDLGLN PSSAGTTIRV PMPALTEETR KGYTKQASAV AEDAKVAVRN VRRDALADLK KLTKDKEISE DEERRAADEI QKLTDKFVAE IDAAFKAKEK DLLAV
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