Gene PputW619_4079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4079 
Symbolfrr 
ID6113048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4503595 
End bp4504152 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content60% 
IMG OID641623873 
Productribosome recycling factor 
Protein accessionYP_001750928 
Protein GI170723240 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.330007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACG ACATCAAGAA AGACGCTCAG GATCGCATGG GCAAGTCCAT CGAGGCTTTG 
GGCCGCAACC TGGCGTCAAT CCGCACCGGT CGCGCCCACC CAAGCATCCT GGACAGCGTC
AAGGTTCCGG CGTGGGGCAG CGAAATGCCG CTGAACCAGG TCGCTGCAGT CTCTGTTGAA
GATGCGCGCA CCCTGAAGAT CGTCGCCCAC GACAAGAACC TCAGCGCTGC CATCGAGAAG
GCCATCCTGA CTTCCGATCT GGGCCTTAAC CCGTCCAGCG CCGGCACCAC CATCCGTGTA
CCGATGCCGG CCCTGACCGA GGAAACCCGC AAGGGTTACA CCAAGCAGGC CAGCGCCGTT
GCCGAAGATG CCAAGGTTGC CGTGCGCAAC GTGCGTCGTG ATGCCCTGGC CGACCTGAAG
AAGCTCACCA AGGACAAGGA AATCAGTGAA GACGAAGAGC GTCGTGCTGC TGACGAGATC
CAGAAGCTGA CCGACAAGTT CGTCGCCGAA ATCGACGCTG CGTTCAAAGC CAAGGAAAAG
GACCTGTTGG CCGTCTAA
 
Protein sequence
MINDIKKDAQ DRMGKSIEAL GRNLASIRTG RAHPSILDSV KVPAWGSEMP LNQVAAVSVE 
DARTLKIVAH DKNLSAAIEK AILTSDLGLN PSSAGTTIRV PMPALTEETR KGYTKQASAV
AEDAKVAVRN VRRDALADLK KLTKDKEISE DEERRAADEI QKLTDKFVAE IDAAFKAKEK
DLLAV