| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4076 |
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| Symbol | |
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| ID | 6113045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4500822 |
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| End bp | 4502012 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641623870 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001750925 |
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| Protein GI | 170723237 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.19851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGCGG TACAGCGCAT TACAGTCCTG GGCGCCACCG GCTCCATCGG CCTCAGTACC
TTGGATGTGA TCGCCCGCCA TCCCGAGCGC TACCAGGTAT ATGCATTGAG CGGCTATACG
CGCATCGATC AGCTGCTGGC CCTGTGCGTG CTGCATTGCC CTGCCTATGC CGTGGTGCCC
AACGGCGAAG CCGCCGTGCG CTTGCGTGAG GGCCTGGCGG CTGCGGGCTG CGCCACCGAG
GTGCTTGAAG GGGAGGCGGG TCTGTGTGAG GTTGCGGCCG CCCCTGAAGT GGATGCGGTG
ATGGCTGCCA TTGTCGGCGC TGCTGGCTTG CGCCCGACAC TGGCCGCCGT CGAGGCGGGC
AAGAAGGTGC TGCTGGCCAA CAAGGAGGCG CTGGTGATGT CCGGCGCGCT GTTCATGGAG
GCTGTGCGCC GCAGTGGTGC GGTGCTGCTG CCGATCGACA GCGAGCACAA TGCCATCTTC
CAGTGCCTGC CGGGTGACTA TGACCGTGGT CTGAGCCAGG TGGGTGTCCG TCGCATTCTG
CTGACTGCCT CGGGCGGGCC GTTTCGCGAG ACGCCTCAGG CTGACTTGGC CGATGTCACG
CCGGAGCAGG CTTGTGCCCA CCCGAACTGG TCCATGGGGC GCAAGATCTC GGTAGACTCG
GCGAGCATGA TGAACAAGGG CCTGGAACTG ATCGAGGCTT GCTGGTTGTT CGATGCGGCG
CCGGACAAGG TCGAAGTGGT GGTGCACCCG CAGAGCGTTA TCCATTCCCT GGTGGACTAC
GTTGACGGTT CGGTGCTGGC CCAGTTGGGT AACCCGGATA TGCGCACACC CATTGCCAAC
GCCCTTGCCT GGCCGGAGCG GATCGATTCC GGTGTGGCCC CGCTGGATCT GTTCGCGATT
GCTCGCCTGG ATTTCCAGGC CCCCGACGAA CTGCGCTTTC CCTGCCTGCG CCTGGCACGG
CAGGCGGCCG AGGCGGGCAA CAGCGCGCCA GCGGTACTCA ATGCGGCCAA CGAAGTTGCG
GTCGAGGCAT TTCTTGAGCG GCGTATCCGC TTCCCGGAGA TCGCGGGTAT GATCGAACAG
GTACTGGCTC AGGAACCCGT GGTGCCTGTG CCTTCGCTGG ATGCGGTATT TGCTGCCGAT
CAGCGCGCCC GAGAGTTGTC CCGCGAGTGG TTGAGGCGCC ACGGCCGCTG A
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| Protein sequence | MTAVQRITVL GATGSIGLST LDVIARHPER YQVYALSGYT RIDQLLALCV LHCPAYAVVP
NGEAAVRLRE GLAAAGCATE VLEGEAGLCE VAAAPEVDAV MAAIVGAAGL RPTLAAVEAG
KKVLLANKEA LVMSGALFME AVRRSGAVLL PIDSEHNAIF QCLPGDYDRG LSQVGVRRIL
LTASGGPFRE TPQADLADVT PEQACAHPNW SMGRKISVDS ASMMNKGLEL IEACWLFDAA
PDKVEVVVHP QSVIHSLVDY VDGSVLAQLG NPDMRTPIAN ALAWPERIDS GVAPLDLFAI
ARLDFQAPDE LRFPCLRLAR QAAEAGNSAP AVLNAANEVA VEAFLERRIR FPEIAGMIEQ
VLAQEPVVPV PSLDAVFAAD QRARELSREW LRRHGR
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