| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4075 |
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| Symbol | |
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| ID | 6113044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4499408 |
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| End bp | 4500760 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641623869 |
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| Product | membrane-associated zinc metalloprotease |
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| Protein accession | YP_001750924 |
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| Protein GI | 170723236 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.274449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGC TGTACATGAT TATCGGCACC CTGGTGGCCT TGGGTGTACT GGTCACTTTC
CACGAATTCG GTCACTTCTG GGTGGCCCGG CGTTGCGGTG TCAAGGTGCT GCGCTTTTCC
GTGGGCTTCG GCCCCGGGCT GTTGCGCTGG CATGACCGCC ACGGTACCGA GTTCGTGGTG
GCGGCTATTC CTTTGGGTGG TTACGTCAAG ATGCTCGACG AGCGTGAAGG CGAAGTACCG
CTAGCGCTGG CCGACCAGTC CTTCAATCGC AAATCGGTTC GCCAGCGCAT CGCCATCGTC
GCCGCCGGTC CGATAGCCAA CTTCCTGCTG GCCATCGTTT TCTTCTGGTT GCTGGCGATG
CTCGGTACCC AACAGATCCG TCCGGTCATC GGTGCGGTAG AGCCTGGCAG CCTGGCAGCA
TCGGCTGGCC TGGTTGCCGG CCAGGAAATT GTTTCCATCG ATGGCAAGGC GACCAGTGGC
TGGTCGGCCG TCAATCTGCA ATTGGTTCGT CGCCTGGGCG AAAGCGGAAC ATTGCAGGTT
GGCGTGCGCG ATGAGGGCTC AAGCGCTGAA CGTCAGTTGC AGGTCAAGCT CGACAGCTGG
CTCAAAGGTG CAGACGAGCC TGATCCGATT CAGTCGCTTG GGCTGCGGCC ATGGCGCCCG
GTAGTGGCGC CCGTGCTGGC CGAGATCGAT CCCAAAGGGC CAGCGGCGGC TGCCGGTCTG
AAAACCGGTG ACAGGCTGTT GAGTATCGAT GGGTTGGCCT TGAGTGACTG GCAGCAGGTT
GTCGATAGCG TGCGCGCCCG CCCTGAAGCC AGGGTCGTGG TGCGTATCGA GCGCGACGGT
ACGGCGCTGG ATGTACCGGT AACACTGGCT CGAAAAGGTG AGGGCGAGGC TGCCGGTGGT
TACCTGGGGG CCGGGGTGAA AAGCGGCGAG TGGCCTGCCG GCATGCTTCG TGAGGTCAGC
TATGGTCCGC TGGACGCGGT AGGCGAGGGC CTTTCCCGGA CGTGGAACAT GAGCGTTCTG
ACCCTCGAAT CCCTGAAGAA AATGCTGTTC GGTGAGCTCT CGGTAAAAAA CTTGAGCGGA
CCGATAACCA TTGCTAAAGT GGCGGGCGCT TCAGCCCAGT CCGGCGTGGG GGATTTCCTG
AATTTCCTTG CCTACCTGAG CATTAGCCTG GGGGTTCTTA ACCTGCTGCC CATTCCAGTG
TTGGATGGGG GGCATTTGCT GTTTTACCTG GTCGAGTGGG CGCGCGGTCG TCCATTGTCG
GATCGGGTTC AAGGTTGGGG GGTCCAGATC GGTATCAGTT TGGTCATAGG GGTGATGTTG
CTCGCCCTGA TCAACGATCT GGGTCGACTA TAA
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| Protein sequence | MTALYMIIGT LVALGVLVTF HEFGHFWVAR RCGVKVLRFS VGFGPGLLRW HDRHGTEFVV
AAIPLGGYVK MLDEREGEVP LALADQSFNR KSVRQRIAIV AAGPIANFLL AIVFFWLLAM
LGTQQIRPVI GAVEPGSLAA SAGLVAGQEI VSIDGKATSG WSAVNLQLVR RLGESGTLQV
GVRDEGSSAE RQLQVKLDSW LKGADEPDPI QSLGLRPWRP VVAPVLAEID PKGPAAAAGL
KTGDRLLSID GLALSDWQQV VDSVRARPEA RVVVRIERDG TALDVPVTLA RKGEGEAAGG
YLGAGVKSGE WPAGMLREVS YGPLDAVGEG LSRTWNMSVL TLESLKKMLF GELSVKNLSG
PITIAKVAGA SAQSGVGDFL NFLAYLSISL GVLNLLPIPV LDGGHLLFYL VEWARGRPLS
DRVQGWGVQI GISLVIGVML LALINDLGRL
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