Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4074 |
Symbol | |
ID | 6113043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4496983 |
End bp | 4499337 |
Gene Length | 2355 bp |
Protein Length | 784 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641623868 |
Product | outer membrane protein assembly complex, YaeT protein |
Protein accession | YP_001750923 |
Protein GI | 170723235 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.184474 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTC TGCTGCTAAC TGCGGTCCTC TCCGCATTGA TGATCGCTGA AGTTCACGCC GAGTCCTTCA CCATCTCCGA TATTCGTGTC AACGGCCTGC AGCGGGTATC CGCCGGCAGC GTTTTCGGTG CCTTGCCCCT GAACGTGGGC GATCAGGCCG ATGATCGGCG CCTGGTGGAG TCGACCCGCT CGCTGTTCAA GACCGGCTTC TTCCAGGATA TCCAGCTGAA CCGCGACGGC GATGTCCTGA TCATCAACGT GGTCGAGCGC CCGTCGGTGT CGAGCATCGA GATCGAAGGC AACAAGGCGA TCAGCACCGA AGACCTGATG AAGGGCCTGA AACAGTCGGG CCTGGCCGAA GGCGAGATCT TCCAGCGTGC CACCCTCGAA GGCGTGCGTA ACGAACTGCA GCGCCAGTAC GTGGCCCAGG GCCGCTACTC GGCCGAGGTC GATGCCGAGG TGGTGCCGCA ACCGCGCAAC CGGGTTGCCC TGAAGATCAA GATCAACGAA GGCACCGTCG CTGCCATCCA GCACATCAAC GTCGTCGGCA ACACCGTGTT CGACGATGAA GAGCTGGCGC AGCTGTTCGA GCTCAAGACC ACCAACTGGC TGTCGTTCTT CAAGAATGAC GACAAGTACG CCCGCGAGAA ACTCTCCGGT GACCTGGAGC GCCTGCGTTC CTACTACCTG GACCGCGGCT ACATCAACAT GGACATCGCT TCCACCCAGG TGTCGATCAC CCCGGACAAG AAGCACGTCT ACATCACCGT CAACGTCAAC GAAGGCGAAA AGTACACCGT TCGTGACGTG AAGCTGTCGG GTGACCTGAA GGTGCCGGAA GACCAGGTCA AGTCGCTGCT GCTGGTGCAG CCGGGCCAGG TGTTCTCGCG CAAGGTGATG ACCACCACTT CCGAGCTGAT CACCCGCCGT TTGGGTAACG AAGGTTATAC CTTCGCCAAC GTCAACGGCG TGCCACAGCC CAATGACGAA GACCACACCG TCGACATCAT GTTCGTGGTC GACCCGGGCA AGCGTGCCTA CGTCAACCGC ATCAACTACC GCGGCAACAC CAAGACCGAA GACGAAGTGC TGCGCCGCGA AATGCGCCAG ATGGAAGGCG GCTGGGCTTC GACCTACCTG ATCGACCAGT CCAAGACCCG CCTGGAGCGC CTCGGCTTCT TCAAGGAAGT CAACGTCGAG ACCCCGCCAG TGCCGGGCAC CGACGACCAG GTCGACGTCA ACTACAGTGT CGAAGAGCAG GCATCCGGCT CGATCACCGC CAGCGTGGGC TTCGCCCAGA GCGCCGGCCT GATCCTGGGC GGTTCGATCA GCCAGACCAA CTTCCTCGGT ACCGGTAACA AGGTTTCCAT CGGTCTGACC CGTTCGGAAT ACCAGACCCG CTACAACTTC GGTTTCGTTG ACCCCTACTT CACTGCCGAC GGCGTCAGCC TGGGTTACAA CGCGTTCTAC CGCAGCACCG ACTACGACGA CCTTGACGTT GACGTGGCCA GCTATGCGGT CGACAGCCTG GGTGCAGGCG TCAGCCTTGG CTACCCGATC AGTGAAACCT CGCGTCTGAC TTACGGCCTC AGCGTGCAGC AGGACAAAAT CAAGACCGGT CGTTATACCG TTGACGAGAT CTTCGACTTC CTCGATCAAG AGGGTGATAA CTTCCTGAAC TTCAAGGCGT CGATCGGTTG GTCCGAGTCG ACCTTGAACA AGGGCGTGCT GGCAACCCGT GGTCACTCCC AGAGCCTGAC CCTGGAATCG ACGATTCCGG GTAGCGATCT GTCGTTCTAC AAGCTTGATT ACCGCGGCCA GCTGTTCAAG CCGATCAACA ACGAGTACAC CCTGCGTCTG CATACCGAAC TGGGCTATGG TGATGGTTAC GGTGGTACTT CGGGCCTGCC GTTCTACGAG AACTACTATG CGGGTGGCTT CAACTCCGTT CGCGGCTTCA AGGACAGCAG CCTGGGCCCA CGTAGTACGC CCAGCACAGG TGCAGCTAAC AGGCCCGGCA CTGAGTTGGA CCCGGACCAA GACCCACTGC CGTTCGGTGG CAACGTCCTG GTGCAAGGTG GCGTAGAGCT GTTGTTCCCG CTGCCGTTCG TGAAGGACCA GCGTTCGCTG CGCACCTCCG TGTTCTGGGA TGTGGGTAAC GTGTTCGACA CCAATTGCGG TTCCAAGCCT GACTGCGCCA AGGTCGGTTT CTCGGACATG GCCAGCTCCG TGGGCCTGGG TGTGACCTGG ATCACCGCGC TGGGCCCGTT GAGCTTCAGC CTGGCAATGC CGGTCAAGAA GCCGGACGAT GCCGATACCC AGGTGTTCCA ATTCTCTCTG GGCCAGACCT TCTAA
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Protein sequence | MKRLLLTAVL SALMIAEVHA ESFTISDIRV NGLQRVSAGS VFGALPLNVG DQADDRRLVE STRSLFKTGF FQDIQLNRDG DVLIINVVER PSVSSIEIEG NKAISTEDLM KGLKQSGLAE GEIFQRATLE GVRNELQRQY VAQGRYSAEV DAEVVPQPRN RVALKIKINE GTVAAIQHIN VVGNTVFDDE ELAQLFELKT TNWLSFFKND DKYAREKLSG DLERLRSYYL DRGYINMDIA STQVSITPDK KHVYITVNVN EGEKYTVRDV KLSGDLKVPE DQVKSLLLVQ PGQVFSRKVM TTTSELITRR LGNEGYTFAN VNGVPQPNDE DHTVDIMFVV DPGKRAYVNR INYRGNTKTE DEVLRREMRQ MEGGWASTYL IDQSKTRLER LGFFKEVNVE TPPVPGTDDQ VDVNYSVEEQ ASGSITASVG FAQSAGLILG GSISQTNFLG TGNKVSIGLT RSEYQTRYNF GFVDPYFTAD GVSLGYNAFY RSTDYDDLDV DVASYAVDSL GAGVSLGYPI SETSRLTYGL SVQQDKIKTG RYTVDEIFDF LDQEGDNFLN FKASIGWSES TLNKGVLATR GHSQSLTLES TIPGSDLSFY KLDYRGQLFK PINNEYTLRL HTELGYGDGY GGTSGLPFYE NYYAGGFNSV RGFKDSSLGP RSTPSTGAAN RPGTELDPDQ DPLPFGGNVL VQGGVELLFP LPFVKDQRSL RTSVFWDVGN VFDTNCGSKP DCAKVGFSDM ASSVGLGVTW ITALGPLSFS LAMPVKKPDD ADTQVFQFSL GQTF
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