| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4060 |
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| Symbol | |
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| ID | 6113029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4480729 |
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| End bp | 4481625 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641623854 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001750909 |
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| Protein GI | 170723221 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000026158 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAGTC GGTGGGAAGG CATCGATGAA TTCGTAGCCG TGGCCGAATC GGGCCAGTTC
ACGGCCGCAG CCGAGCGCAT GGGCGTATCG TCGTCGCATA TAAGCCGGCA GATCGCCCGC
CTTGAGGAGC GCTTGCAAAC CCGCCTGCTG TATCGCAGTA CGCGCCGCGT GACCCTGAGT
GAAGCCGGGC AGACATTCCT GCAACATTGC CAACGCCTGC AGGATGGCCG TGAAGAAGCA
CTGCGCGCCA TGGGTGACCT GGCCAGCGAA CCCAAGGGGC TATTGCGCAT GACCTGTGCT
GTGGCTTATG GCGAGCGCTT CATCGTGCCG CTGGTGACGC GCTTCATGGC GCTGTATCCA
CAGTTGCGGG TCGAAGTGGA GTTGAGCAAC CGCACGCTGG ACCTGCTGCA CGAAGGCATG
GACCTGGCCA TTCGCCTGGG CCGGCTTGCC GATTCGAGGT TGGTGGCGAC GCGCCTGGCG
CCACGGCGCA TGTACCTGTG CGCTTCACCC GCCTACCTTG AGCGCTACGG CCGTCCGCAC
AGCCTGTCGG AACTGGCCCG GCACAACTGC CTGGTGGGCA GCTCGGACCT GTGGGCATTG
CAACAGGACG GGCGCGAGAT CAGCCAACGG GTGCAGGGCA ACTGGCGGTG CAATAGTGGC
CAGGCAGTGC TGGATGCCGC TTTACTGGGA ATGGGGCTAT GCCAGTTGCC GGATTACTAC
GTACTGGAAC ACCTAAACAG CGGCGCACTG GTGTCGTTGC TGGAAGCGCA TCAGCCGCCC
AATACGGCGG TGTGGGCGCT GTATCCGCAG CAGCGGCACC TGTCGCCCAA GGTTCGGCGG
CTGGTGGATT ATCTGAAGGA AGGGTTAGCG GGGATGCCGG AGTACCGAAT GGCCTGA
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| Protein sequence | MISRWEGIDE FVAVAESGQF TAAAERMGVS SSHISRQIAR LEERLQTRLL YRSTRRVTLS
EAGQTFLQHC QRLQDGREEA LRAMGDLASE PKGLLRMTCA VAYGERFIVP LVTRFMALYP
QLRVEVELSN RTLDLLHEGM DLAIRLGRLA DSRLVATRLA PRRMYLCASP AYLERYGRPH
SLSELARHNC LVGSSDLWAL QQDGREISQR VQGNWRCNSG QAVLDAALLG MGLCQLPDYY
VLEHLNSGAL VSLLEAHQPP NTAVWALYPQ QRHLSPKVRR LVDYLKEGLA GMPEYRMA
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