Gene PputW619_4060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4060 
Symbol 
ID6113029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4480729 
End bp4481625 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content63% 
IMG OID641623854 
ProductLysR family transcriptional regulator 
Protein accessionYP_001750909 
Protein GI170723221 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000026158 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCAGTC GGTGGGAAGG CATCGATGAA TTCGTAGCCG TGGCCGAATC GGGCCAGTTC 
ACGGCCGCAG CCGAGCGCAT GGGCGTATCG TCGTCGCATA TAAGCCGGCA GATCGCCCGC
CTTGAGGAGC GCTTGCAAAC CCGCCTGCTG TATCGCAGTA CGCGCCGCGT GACCCTGAGT
GAAGCCGGGC AGACATTCCT GCAACATTGC CAACGCCTGC AGGATGGCCG TGAAGAAGCA
CTGCGCGCCA TGGGTGACCT GGCCAGCGAA CCCAAGGGGC TATTGCGCAT GACCTGTGCT
GTGGCTTATG GCGAGCGCTT CATCGTGCCG CTGGTGACGC GCTTCATGGC GCTGTATCCA
CAGTTGCGGG TCGAAGTGGA GTTGAGCAAC CGCACGCTGG ACCTGCTGCA CGAAGGCATG
GACCTGGCCA TTCGCCTGGG CCGGCTTGCC GATTCGAGGT TGGTGGCGAC GCGCCTGGCG
CCACGGCGCA TGTACCTGTG CGCTTCACCC GCCTACCTTG AGCGCTACGG CCGTCCGCAC
AGCCTGTCGG AACTGGCCCG GCACAACTGC CTGGTGGGCA GCTCGGACCT GTGGGCATTG
CAACAGGACG GGCGCGAGAT CAGCCAACGG GTGCAGGGCA ACTGGCGGTG CAATAGTGGC
CAGGCAGTGC TGGATGCCGC TTTACTGGGA ATGGGGCTAT GCCAGTTGCC GGATTACTAC
GTACTGGAAC ACCTAAACAG CGGCGCACTG GTGTCGTTGC TGGAAGCGCA TCAGCCGCCC
AATACGGCGG TGTGGGCGCT GTATCCGCAG CAGCGGCACC TGTCGCCCAA GGTTCGGCGG
CTGGTGGATT ATCTGAAGGA AGGGTTAGCG GGGATGCCGG AGTACCGAAT GGCCTGA
 
Protein sequence
MISRWEGIDE FVAVAESGQF TAAAERMGVS SSHISRQIAR LEERLQTRLL YRSTRRVTLS 
EAGQTFLQHC QRLQDGREEA LRAMGDLASE PKGLLRMTCA VAYGERFIVP LVTRFMALYP
QLRVEVELSN RTLDLLHEGM DLAIRLGRLA DSRLVATRLA PRRMYLCASP AYLERYGRPH
SLSELARHNC LVGSSDLWAL QQDGREISQR VQGNWRCNSG QAVLDAALLG MGLCQLPDYY
VLEHLNSGAL VSLLEAHQPP NTAVWALYPQ QRHLSPKVRR LVDYLKEGLA GMPEYRMA