Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4050 |
Symbol | |
ID | 6113019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4469858 |
End bp | 4472431 |
Gene Length | 2574 bp |
Protein Length | 857 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641623844 |
Product | DNA mismatch repair protein MutS |
Protein accession | YP_001750899 |
Protein GI | 170723211 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.593835 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000000609956 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTGATC TTTCCGCACA CACACCGATG ATGCAGCAGT ACTGGAAGCT GAAAAACCAG CACCCGGACC AGCTGATGTT CTACCGCATG GGCGACTTTT ACGAAATCTT CTATGAAGAT GCGAAAAAAG CCGCAAAACT GCTGGATATC ACCCTGACAG CCCGTGGCCA GTCAGCCGGC CAGTCGATCC CCATGTGCGG AATTCCTTTC CACTCGCTGG AAGGCTACCT GGCCAAGCTG GTCAAGCTCG GCGAGTCGGT GGTGATCTGC GAGCAGATCG GCGACCCCGC CACCAGCAAG GGCCCGGTAG AACGTCAGGT GGTGCGCATC ATCACCCCCG GCACAGTCAG CGACGAAGCG TTACTCGACG AGCGCCGCGA CAACCTGATT GCCGCACTGC TGGGGGACGA GCGCCTGTTT GGCCTGGCGG TGCTGGATAT CACCAGCGGC AACTTCAGCG TGCAGGAGAT CAAGGGCTGG GAAAACCTGC TGGCCGAGCT TGAACGCATC AACCCTGTCG AACTGCTGAT CCCCGACGAC TGGCCCCGCG ACCTGCCGGC CGAGAAACGT CCGGGCGCAC GCCGACGAGC CCCTTGGGAC TTCGACCGCG ACTCGGCACG CAAGGCTCTG TGTCAGCAGT TCGCAACCAA AGACCTCAAG GGCTTTGGTT GCGACAAGCT GACCCTGGCC ATCGGCGCCG CCGGCTGCCT GCTGACCTAC GCCAAGGAAA CCCAACGCAC CGCCCTGCCC CACCTGCGCA GCTTGCGCCA TGAGCGCCTG GACGACACCG TGATCCTCGA CGGGGCCAGC CGCCGCAACC TGGAGCTGGA CATCAACCTG GCAGGTGGTC GCGACAATAC CTTGCAGTCG GTGATCGACC GCTGCCAGAC CGCAATGGCC AGCCGCCTGC TGACCCGTTG GCTGAACCGC CCGCTGCGCG ACCTCAAGGT CTTGCAGGCG CGCCAGGATT CGATTCGCTG CCTGCTCGAT GGCTACCGCT TCGAAAAACT GCAGCCGCAA CTCAAGGAAA TTGGCGATAT CGAGCGGATC CTCGCCCGTA TCGGCCTGCG TAATGCCCGC CCGCGCGATC TGGCGCGCCT GCGTGATGCC CTCGGCGCCC TGCCCGAACT GCAGAACGCC ATGGCTGAGC TGGAAGCCCC ACACCTGGCG CGCTTGGCGG CCATCACCGG CACCTACCCG GAGCTGGCCA GCCTGCTGGA GCGGGCAATC ATAGACAACC CGCCAGCAGT GATCCGCGAC GGCGGCGTAC TCAAGGCCGG CTATGACAAC GAGCTGGACG ATCTGCTGGC GATCAGTGAG AACGCCGGCC AGTTCCTGAT CGACCTGGAA GCCCGCGAGA AGGCCCGCAC CGGTCTTGCC AACCTGAAAG TCGGCTACAA CCGCGTGCAT GGCTACTTCA TCGAGCTGCC GACCAAGCAG GCCGAACAGG CCCCGGGCGA CTACATTCGT CGCCAGACCC TCAAAGGCGC CGAGCGCTTC ATCACGCCGG AGCTCAAGGC TTTCGAGGAC AAGGCGCTGT CGGCCAAGAG CCGCGCCCTG GCCCGCGAGA AGATGCTGTA CGACGCGTTG CTCGAAACAC TCATCAGTCA CCTTGCACCG CTGCAGGACA GCGCCGCGGC GCTGGCCGAG CTGGACGTGC TGAGCAACCT TGCCGAGCGG GCGCTCAACC TGGACCTGAA CTGCCCCCGT TTCGTCGACG AACCGTGCCT GCGCATCGAC CAGGGGCGTC ACCCGGTGGT CGAACAGGTA CTGACCACGC CGTTCGTAGC CAACGACCTG GGCCTGGACA ACAGCACCCG GATGCTGATC ATCACCGGTC CGAACATGGG TGGTAAATCT ACCTACATGC GCCAGACCGC ACTGATAGTG CTGATGGCGC ACATCGGCAG TTTCGTTCCG GCGGCCAGCT GCGAACTATC GCTGGTCGAT CGCATCTTCA CCCGTATCGG CTCCAGTGAC GACCTGGCAG GAGGCCGCTC GACGTTCATG GTCGAGATGA GCGAAACCGC CAACATTCTG CACAACGCCA CTGACCGCAG CTTGGTACTG ATGGACGAAG TCGGCCGTGG CACCAGCACC TTCGACGGTT TGTCGCTGGC CTGGGCGGCT GCCGAGCGCC TGGCACAGCT GCGTGCGTAC ACGCTGTTCG CCACGCACTA CTTCGAGCTG ACCGTACTGC CTGAAAGCGA ACCGCTGGTG GCCAACGTCC ACCTGAACGC TACCGAACAC AACGAGCGCA TCGTGTTCCT GCACCATGTG CTGCCTGGCC CCGCCAGCCA GAGCTACGGC CTGGCCGTGG CGCAACTGGC AGGCGTACCG TCGCCGGTCA TCCAGCGTGC GCGCGAGCAC CTCGGCCGGC TGGAGACCAG CAGCCTGCCC CACGAACAAG CTGTCTCGAA AAAAACCAAG GGCGAGCCAC AAGCACCGCA CCAGAGCGAC CTGTTCGCCA GCCTGCCACA CCCGGCAATC GAAAAGCTGG GCAAGCTGGA CCTGGACGAC ATGACTCCGC GTCAAGCTAT CGAAATGCTA TATCAACTAA AGAACCTGTT ATAA
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Protein sequence | MSDLSAHTPM MQQYWKLKNQ HPDQLMFYRM GDFYEIFYED AKKAAKLLDI TLTARGQSAG QSIPMCGIPF HSLEGYLAKL VKLGESVVIC EQIGDPATSK GPVERQVVRI ITPGTVSDEA LLDERRDNLI AALLGDERLF GLAVLDITSG NFSVQEIKGW ENLLAELERI NPVELLIPDD WPRDLPAEKR PGARRRAPWD FDRDSARKAL CQQFATKDLK GFGCDKLTLA IGAAGCLLTY AKETQRTALP HLRSLRHERL DDTVILDGAS RRNLELDINL AGGRDNTLQS VIDRCQTAMA SRLLTRWLNR PLRDLKVLQA RQDSIRCLLD GYRFEKLQPQ LKEIGDIERI LARIGLRNAR PRDLARLRDA LGALPELQNA MAELEAPHLA RLAAITGTYP ELASLLERAI IDNPPAVIRD GGVLKAGYDN ELDDLLAISE NAGQFLIDLE AREKARTGLA NLKVGYNRVH GYFIELPTKQ AEQAPGDYIR RQTLKGAERF ITPELKAFED KALSAKSRAL AREKMLYDAL LETLISHLAP LQDSAAALAE LDVLSNLAER ALNLDLNCPR FVDEPCLRID QGRHPVVEQV LTTPFVANDL GLDNSTRMLI ITGPNMGGKS TYMRQTALIV LMAHIGSFVP AASCELSLVD RIFTRIGSSD DLAGGRSTFM VEMSETANIL HNATDRSLVL MDEVGRGTST FDGLSLAWAA AERLAQLRAY TLFATHYFEL TVLPESEPLV ANVHLNATEH NERIVFLHHV LPGPASQSYG LAVAQLAGVP SPVIQRAREH LGRLETSSLP HEQAVSKKTK GEPQAPHQSD LFASLPHPAI EKLGKLDLDD MTPRQAIEML YQLKNLL
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