Gene PputW619_4050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4050 
Symbol 
ID6113019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4469858 
End bp4472431 
Gene Length2574 bp 
Protein Length857 aa 
Translation table11 
GC content63% 
IMG OID641623844 
ProductDNA mismatch repair protein MutS 
Protein accessionYP_001750899 
Protein GI170723211 
COG category[L] Replication, recombination and repair 
COG ID[COG0249] Mismatch repair ATPase (MutS family) 
TIGRFAM ID[TIGR01070] DNA mismatch repair protein MutS 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.593835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000609956 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTGATC TTTCCGCACA CACACCGATG ATGCAGCAGT ACTGGAAGCT GAAAAACCAG 
CACCCGGACC AGCTGATGTT CTACCGCATG GGCGACTTTT ACGAAATCTT CTATGAAGAT
GCGAAAAAAG CCGCAAAACT GCTGGATATC ACCCTGACAG CCCGTGGCCA GTCAGCCGGC
CAGTCGATCC CCATGTGCGG AATTCCTTTC CACTCGCTGG AAGGCTACCT GGCCAAGCTG
GTCAAGCTCG GCGAGTCGGT GGTGATCTGC GAGCAGATCG GCGACCCCGC CACCAGCAAG
GGCCCGGTAG AACGTCAGGT GGTGCGCATC ATCACCCCCG GCACAGTCAG CGACGAAGCG
TTACTCGACG AGCGCCGCGA CAACCTGATT GCCGCACTGC TGGGGGACGA GCGCCTGTTT
GGCCTGGCGG TGCTGGATAT CACCAGCGGC AACTTCAGCG TGCAGGAGAT CAAGGGCTGG
GAAAACCTGC TGGCCGAGCT TGAACGCATC AACCCTGTCG AACTGCTGAT CCCCGACGAC
TGGCCCCGCG ACCTGCCGGC CGAGAAACGT CCGGGCGCAC GCCGACGAGC CCCTTGGGAC
TTCGACCGCG ACTCGGCACG CAAGGCTCTG TGTCAGCAGT TCGCAACCAA AGACCTCAAG
GGCTTTGGTT GCGACAAGCT GACCCTGGCC ATCGGCGCCG CCGGCTGCCT GCTGACCTAC
GCCAAGGAAA CCCAACGCAC CGCCCTGCCC CACCTGCGCA GCTTGCGCCA TGAGCGCCTG
GACGACACCG TGATCCTCGA CGGGGCCAGC CGCCGCAACC TGGAGCTGGA CATCAACCTG
GCAGGTGGTC GCGACAATAC CTTGCAGTCG GTGATCGACC GCTGCCAGAC CGCAATGGCC
AGCCGCCTGC TGACCCGTTG GCTGAACCGC CCGCTGCGCG ACCTCAAGGT CTTGCAGGCG
CGCCAGGATT CGATTCGCTG CCTGCTCGAT GGCTACCGCT TCGAAAAACT GCAGCCGCAA
CTCAAGGAAA TTGGCGATAT CGAGCGGATC CTCGCCCGTA TCGGCCTGCG TAATGCCCGC
CCGCGCGATC TGGCGCGCCT GCGTGATGCC CTCGGCGCCC TGCCCGAACT GCAGAACGCC
ATGGCTGAGC TGGAAGCCCC ACACCTGGCG CGCTTGGCGG CCATCACCGG CACCTACCCG
GAGCTGGCCA GCCTGCTGGA GCGGGCAATC ATAGACAACC CGCCAGCAGT GATCCGCGAC
GGCGGCGTAC TCAAGGCCGG CTATGACAAC GAGCTGGACG ATCTGCTGGC GATCAGTGAG
AACGCCGGCC AGTTCCTGAT CGACCTGGAA GCCCGCGAGA AGGCCCGCAC CGGTCTTGCC
AACCTGAAAG TCGGCTACAA CCGCGTGCAT GGCTACTTCA TCGAGCTGCC GACCAAGCAG
GCCGAACAGG CCCCGGGCGA CTACATTCGT CGCCAGACCC TCAAAGGCGC CGAGCGCTTC
ATCACGCCGG AGCTCAAGGC TTTCGAGGAC AAGGCGCTGT CGGCCAAGAG CCGCGCCCTG
GCCCGCGAGA AGATGCTGTA CGACGCGTTG CTCGAAACAC TCATCAGTCA CCTTGCACCG
CTGCAGGACA GCGCCGCGGC GCTGGCCGAG CTGGACGTGC TGAGCAACCT TGCCGAGCGG
GCGCTCAACC TGGACCTGAA CTGCCCCCGT TTCGTCGACG AACCGTGCCT GCGCATCGAC
CAGGGGCGTC ACCCGGTGGT CGAACAGGTA CTGACCACGC CGTTCGTAGC CAACGACCTG
GGCCTGGACA ACAGCACCCG GATGCTGATC ATCACCGGTC CGAACATGGG TGGTAAATCT
ACCTACATGC GCCAGACCGC ACTGATAGTG CTGATGGCGC ACATCGGCAG TTTCGTTCCG
GCGGCCAGCT GCGAACTATC GCTGGTCGAT CGCATCTTCA CCCGTATCGG CTCCAGTGAC
GACCTGGCAG GAGGCCGCTC GACGTTCATG GTCGAGATGA GCGAAACCGC CAACATTCTG
CACAACGCCA CTGACCGCAG CTTGGTACTG ATGGACGAAG TCGGCCGTGG CACCAGCACC
TTCGACGGTT TGTCGCTGGC CTGGGCGGCT GCCGAGCGCC TGGCACAGCT GCGTGCGTAC
ACGCTGTTCG CCACGCACTA CTTCGAGCTG ACCGTACTGC CTGAAAGCGA ACCGCTGGTG
GCCAACGTCC ACCTGAACGC TACCGAACAC AACGAGCGCA TCGTGTTCCT GCACCATGTG
CTGCCTGGCC CCGCCAGCCA GAGCTACGGC CTGGCCGTGG CGCAACTGGC AGGCGTACCG
TCGCCGGTCA TCCAGCGTGC GCGCGAGCAC CTCGGCCGGC TGGAGACCAG CAGCCTGCCC
CACGAACAAG CTGTCTCGAA AAAAACCAAG GGCGAGCCAC AAGCACCGCA CCAGAGCGAC
CTGTTCGCCA GCCTGCCACA CCCGGCAATC GAAAAGCTGG GCAAGCTGGA CCTGGACGAC
ATGACTCCGC GTCAAGCTAT CGAAATGCTA TATCAACTAA AGAACCTGTT ATAA
 
Protein sequence
MSDLSAHTPM MQQYWKLKNQ HPDQLMFYRM GDFYEIFYED AKKAAKLLDI TLTARGQSAG 
QSIPMCGIPF HSLEGYLAKL VKLGESVVIC EQIGDPATSK GPVERQVVRI ITPGTVSDEA
LLDERRDNLI AALLGDERLF GLAVLDITSG NFSVQEIKGW ENLLAELERI NPVELLIPDD
WPRDLPAEKR PGARRRAPWD FDRDSARKAL CQQFATKDLK GFGCDKLTLA IGAAGCLLTY
AKETQRTALP HLRSLRHERL DDTVILDGAS RRNLELDINL AGGRDNTLQS VIDRCQTAMA
SRLLTRWLNR PLRDLKVLQA RQDSIRCLLD GYRFEKLQPQ LKEIGDIERI LARIGLRNAR
PRDLARLRDA LGALPELQNA MAELEAPHLA RLAAITGTYP ELASLLERAI IDNPPAVIRD
GGVLKAGYDN ELDDLLAISE NAGQFLIDLE AREKARTGLA NLKVGYNRVH GYFIELPTKQ
AEQAPGDYIR RQTLKGAERF ITPELKAFED KALSAKSRAL AREKMLYDAL LETLISHLAP
LQDSAAALAE LDVLSNLAER ALNLDLNCPR FVDEPCLRID QGRHPVVEQV LTTPFVANDL
GLDNSTRMLI ITGPNMGGKS TYMRQTALIV LMAHIGSFVP AASCELSLVD RIFTRIGSSD
DLAGGRSTFM VEMSETANIL HNATDRSLVL MDEVGRGTST FDGLSLAWAA AERLAQLRAY
TLFATHYFEL TVLPESEPLV ANVHLNATEH NERIVFLHHV LPGPASQSYG LAVAQLAGVP
SPVIQRAREH LGRLETSSLP HEQAVSKKTK GEPQAPHQSD LFASLPHPAI EKLGKLDLDD
MTPRQAIEML YQLKNLL