Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4034 |
Symbol | |
ID | 6113003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4456477 |
End bp | 4457511 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641623828 |
Product | late control D family protein |
Protein accession | YP_001750883 |
Protein GI | 170723195 |
COG category | [R] General function prediction only |
COG ID | [COG3500] Phage protein D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.356651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000000337876 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCAACCGC AATTTCGCAT CCAGGCCGAT GGCCAGGACA TTACTTCGTT GATCAATGAT CGTCTGTTGC TATTGCGCAC CACTGACAAG CCTGGGTTGG AGTCGGACGA CTTCGAGTTA CGCATCGATG CGCGAGACGG CACCGTGGCG TTGCTTGCCC GTGGCGCGGT GATTGAGGTG CATATGGGCT ACGCCGGTCA ACCGCTGACC CGGTTGGGGC GTTACACCGT CGATGAGGTG GAGCTGTTCG GTCCACCGGA CACCCTGTTG ATTCGCGGTA AGGCAAGTGA CTTGAGCGGC AGCGGCAGAA CCGTGCGCAG TGGCAGTTGG GAGGTAGTGA CGCTGCAACG CATAGTCGCC GAGATTGGAG TGCGTAATGG CTGGCAGGCG ATCTGCCCGG TGCTTATTCA GGTACCGCGC GTCGACCAGT ACAACGAATC GGATTTCAAC TTCATCACCC GCCTGGCCCG CCAGTATGAC TGCACCGCCA AACTGGCCAA CAGCCAGTTG CTGGTGCTGC CACGCCAGGC GGGGCGCAGC GCCAGTGGCA AGCCCCTGGA CGTGGTCGGC ATCGCCCATC ACCAGGTCAG CCAGTGGCAT TTGCGGCTGG ACGACAAGGC GGGGCGCCAG GCTGTGCGTA CTCGCCATCA GGATACTGCC AGTGGTGAAT CGAAGACCCT CGAACTGGTC AATGCCGAGG CTGGAGGCGC CCAGCGGCCG GTGCATACGG ACCGACACCT TTACCCCAAC CGTGCTGCAG CCGAACAGGC GGCCAGGGCG CGGCTAGCCA GTTTCAATCG CGAAAGCGCC AGTGTGCGCC TGGATCTGCC TGGGCGCACC GACCTGTTTG CCGAGCGCAG CATCGATTTG CATGGCTTTG TCGAGGGTAT GAACGGGCAG TATCAGATCG ACTCGGTGGA GCAGGTATTC ACCCTGTCGG GCTGGCGTAC AACCGTACAG GGGAATGGTG GCAAGGCAGG CAAGTTGAAG GCCAGAGGCC CCGCCCCGCG TCGTGAGGCA GTGACCAAGG CCTGA
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Protein sequence | MQPQFRIQAD GQDITSLIND RLLLLRTTDK PGLESDDFEL RIDARDGTVA LLARGAVIEV HMGYAGQPLT RLGRYTVDEV ELFGPPDTLL IRGKASDLSG SGRTVRSGSW EVVTLQRIVA EIGVRNGWQA ICPVLIQVPR VDQYNESDFN FITRLARQYD CTAKLANSQL LVLPRQAGRS ASGKPLDVVG IAHHQVSQWH LRLDDKAGRQ AVRTRHQDTA SGESKTLELV NAEAGGAQRP VHTDRHLYPN RAAAEQAARA RLASFNRESA SVRLDLPGRT DLFAERSIDL HGFVEGMNGQ YQIDSVEQVF TLSGWRTTVQ GNGGKAGKLK ARGPAPRREA VTKA
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