Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4033 |
Symbol | |
ID | 6113002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4455901 |
End bp | 4456449 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641623827 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001750882 |
Protein GI | 170723194 |
COG category | [R] General function prediction only |
COG ID | [COG3179] Predicted chitinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.148282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000000260373 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGCTTACAG AAGCGCAATT GCTACAGATT TTGCCCAACG CCCGTTATGT CGCAGGTGTT TTTCTTCCTG CGCTGAACAT CACCCTGCCA CGGTGGGAGA TCGATAACCC CAAGCGGTTG GCTGCGTTCA TCGCCCAGGT CGGCCATGAG TCCAGCCAGT TACGTTATGT GAAGGAACTG GGCAGCAATA GCTACCTGGC CCGTTACGAC ACTGGAAGCG TGGCCCGGCG CCTGGGCAAT ACACCGCAGG AGGACGGCGA CGGCCAGTTT TATTGTGGAC GGGGCCTGAT CCAGGTGACC GGTCGCAGCA ACTACCAGGC CTGTAGTCGG GCATTGTTCA ACGACGAGCG TCTGCTAGCC CAGCCGCAAC TGCTGGAGCA GCCGCGCTGG GCGTGTGAGT CAGCGGCGTG GTTCTGGCAT TCCCGGGGGT TGAATGGGTT GGCGGACCTG GGCGAGTTCA ACCGTATCAC GCGCCATATA AATGGTGGGT TGAACGGGCT GGAGGATCGC TTGAAGCTCT GGGCGCGGGC GCGTGAGGTG CTGTGTTGA
|
Protein sequence | MLTEAQLLQI LPNARYVAGV FLPALNITLP RWEIDNPKRL AAFIAQVGHE SSQLRYVKEL GSNSYLARYD TGSVARRLGN TPQEDGDGQF YCGRGLIQVT GRSNYQACSR ALFNDERLLA QPQLLEQPRW ACESAAWFWH SRGLNGLADL GEFNRITRHI NGGLNGLEDR LKLWARAREV LC
|
| |