| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4019 |
|---|
| Symbol | |
|---|
| ID | 6112988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 4445703 |
|---|
| End bp | 4446164 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641623813 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001750868 |
|---|
| Protein GI | 170723180 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4807] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.00109287 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACCACA ACGATGTACT GCGCAGCCTG CGCTACATGC TCAAGGTGAA CGACGCCAAG
ATGGCCGAGA TCATCGCGCT CTCGGGCCTG GAGGTTAATC CGGTGGTGCT CGCCACCTAC
CTGAAGAAAG AGGACGAGCC CGGTTTTGTG CGCTGCCCCG AACGGGTCAT GGCGCACTTT
CTCGACGGCC TGGTCTTCCA TCGCCGCGGC AAGGACGATA GCCGTCCGCC ACAGCCTGTA
GAGCTGCCGG TGACCAACAA CACCATCCTC AAGAAGCTGC GCGTAGCCTT TGAGCTCAAG
GAAGACGACC TGCATGTGAT CCTCAAGTCG GTCGATTTCC CGGTTTCCAA GCCCGAACTC
AGCGCGTTGT TCCGCAAAGT GGGCCATGAC AACTATCGCC CTTGCGGCGA CCAGTTGCTG
CGCAACTTCC TCAAGGGCCT GGCCCTGCGC GAGCGCGGCT GA
|
|---|
| Protein sequence | MNHNDVLRSL RYMLKVNDAK MAEIIALSGL EVNPVVLATY LKKEDEPGFV RCPERVMAHF
LDGLVFHRRG KDDSRPPQPV ELPVTNNTIL KKLRVAFELK EDDLHVILKS VDFPVSKPEL
SALFRKVGHD NYRPCGDQLL RNFLKGLALR ERG
|
|---|
| |