Gene PputW619_4013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4013 
Symbol 
ID6112982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4436844 
End bp4439486 
Gene Length2643 bp 
Protein Length880 aa 
Translation table11 
GC content64% 
IMG OID641623807 
Producthypothetical protein 
Protein accessionYP_001750862 
Protein GI170723174 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein
[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.144886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC GTAACCCAGA ACACCAGGCA CCCATAGCCT CAACCCTGCC CACGGCTGCC 
CAGCGCTTGC CGTGGCTGGA GCGGGTGAGC CGCTGTCGCC AGCCCATCAC CCTGGCAGTT
ACCTTGGCGC TGTTCGCAAT GGCACTGATA GCCTGCCGCC ACTTGCTCAG TGAACTGGAT
ATCCATGCTC TGCACGATGC GATGCTAAGC GTGCCCACCC ACTCGCTGGC CGGCGCGCTA
CTCGCTGCGG TTATCGGGTT CGTGATCCTG CTTGGATATG AATGGTCTGC CTGCCGTTAT
GCCGCCGTGA AGTTGCCTAG GCGTACGCTT CTGTTAGGCG GTTTCAGCGC ATTTGCCATT
GGTAACGCTA TTGGCTTGTC GATGCTCTCG GGCGGTTCGG TGCGCTATCG CCTGTATGCT
CGAGAAGGCC TGGGCGCTGT CGAAGTCGCG CGCATGACAG TGTTCGCCAG CCTTTCTTTG
GGCTGCGCCC TGCCCCCTCT GGCGGCACTG GCCACGTTGA GCAACTTGCC AGCTGCGGCT
ACCGCCCTGC ACCTGCCCAC CCCTGTACTG GCCACAGTCG CTATGGGCGT GCTTGCACTG
ACCGCCGTCC TGGTGACTGG CCTGTATCGC CGACGCCTGG CAGAGCAGCC GCTACCAGAC
AGCCTGCTGG TGCAACTGGG GCGCCGGACG CTGCGCCTGC CTGGCGCACG CCTGGCAGCA
CTGCAACTGG TAATCACCGC GCTGGATGTA GCCGCCGCCG CGACCGTCCT TTACCTGCTG
CTCCCAGAAG CCCCTCCGTT CGGCGCGTTC GTCCTCGTCT ATCTGCTGGC CCTGGCTGGC
GGTGTACTTA GCCATGTGCC TGGCGGCATC GGGGTGTTCG AGGCAATTCT GCTCGCAGCC
TTCGCCAATC AGCTCGGCGC CGCGCCACTG GCCGCCGCAC TGCTGCTGTA CCGCTTGATC
TATGTAGTAC TGCCTTTGCT GGTGGCCTGT GCGCTGCTGC TGGCCAACGA AGCTAGGCGC
CTGCTGTTTG CGCAGCAGGC GCTCAAGGCC GCCTCCGGGC TGGCTGCACC GGTGCTGGCG
ATCCTCGTGT TTCTCTCCGG TGTGGTGCTG TTGTTCTCCG GCGCCACACC GGAAATCGAC
ATCCGCCTGG AACACATGGG CTTTCTGGTG CCGCACCGCC TCATCGATGC CTCGCACTTC
GGTGCCAGCC TGATTGGCGT GCTGTGCCTT TTGCTGGCCC AGGGCTTGCG CCGACGCCTG
TCTGCCGCCT GGCTACTGAC TACCGTACTG CTCCTGGTTG GCGCACTGCT GTCGCTGCTC
AAGGGCTTCG ACTGGGAAGA GGCCAGCCTG CTGACCTTCA CCGCTGCCCT GCTCGCGTTG
TTCCGCCGTT CGTTCTACCG CCCAAGCAGG CTGCTGGAAC TGCCGTTTTC CCCGGTGTAC
CTGGCAGCGA GTGCTTGCGT GGTCGGTGCT TCGGTGTGGC TACTGCTGTT TGCCTACCAG
GATGTGCCCT ACAGCCATCA GCTGTGGTGG CAGTTCACGC TTGACGCCGA TGCCCCACGC
GGCCTGCGCG CCGCCATGGG CAGCGCGGTA CTGTTGCTGG TCGTGGCCCT GACCTGGCTG
CTGCGCACTG CCCGGCCAGT CATCCACCTG CCAGACGACG AGGAGATACA GCGCGCCAAC
CGCATCCTGC AGGCTGGCGA CCAACCTGAC GGCGGCCTGG CGCTGACCGG TGACAAGGCC
CTGCTGTTTC ACCCCAATGG CAACGCCTTT TTGATGTACG CGCGCCGGGG CCGCAGCCTG
GTGGCCCTGT ACGACCCGAT CGGCCCGGCC CAGGAACGTG CCGAGATGAT CTGGCAATTC
CGCGATCTGT GCGACCTGCA CCACGCCCGC CCGGTGTTCT ACCAGGTGCG TGCGGAGAAT
CTGCCGTTCT ACATGGACAT CGGCCTGACC GCACTCAAGC TCGGCGAAGA AGCCCGAGTC
GACTTGCGCC GCTTCGACAT CGAAGCCAAA GGCAAGGAAA TGAAAGACCT GCGCTACACC
TGGAACCGCG GCGGCCGCGA TGGCCTGAGC CTGGAGATAC ATGAACCCGG CCAGGCCCCC
ATGGTTGAGC TCAAGGAAAT CTCGGATGCC TGGCTCGGCG GCAAGAACGT GCGCGAAAAA
GGCTTCTCGC TGGGGCGCTT CAGCCTTGAG TACCTGCAGC ATTTTCGCAT CGCCCTGGTT
CGCTACCAGG GCCGGCCGGT GGCGTTTGCC AACCTGCTTG AAACTCACAG CAACGAACTG
GCCAGCCTCG ATCTGATGCG TGCCCACCCC CAGGCGCCGA AGCTGACCAT GGAATTCATG
ATGATCGGCC TGATCCTGCA CTACAAAAGC CATGGGTACG GCCGTTTCAG CCTGGGCATG
GTACCGCTTT CCGGCTTGCA GCCACGGCGC GGCGCCCCCT TGGCCCAGCG CCTGGGCTCG
ATGGTGTTCC GTCGCGGTGA ACAGCTTTAC AACTTCCAAG GGCTACGCCG CTTCAAGGAC
AAGTTCCAAC CGGACTGGGA ACCCCGCTAC ATGGCTGTGC CGGCCGGGCT CGACCCGCTG
GTGGCACTGG CCGACACTGC CGCCCTGATT GCGGGCGGCC TGACTGGATT GGTGAAACGT
TGA
 
Protein sequence
MTDRNPEHQA PIASTLPTAA QRLPWLERVS RCRQPITLAV TLALFAMALI ACRHLLSELD 
IHALHDAMLS VPTHSLAGAL LAAVIGFVIL LGYEWSACRY AAVKLPRRTL LLGGFSAFAI
GNAIGLSMLS GGSVRYRLYA REGLGAVEVA RMTVFASLSL GCALPPLAAL ATLSNLPAAA
TALHLPTPVL ATVAMGVLAL TAVLVTGLYR RRLAEQPLPD SLLVQLGRRT LRLPGARLAA
LQLVITALDV AAAATVLYLL LPEAPPFGAF VLVYLLALAG GVLSHVPGGI GVFEAILLAA
FANQLGAAPL AAALLLYRLI YVVLPLLVAC ALLLANEARR LLFAQQALKA ASGLAAPVLA
ILVFLSGVVL LFSGATPEID IRLEHMGFLV PHRLIDASHF GASLIGVLCL LLAQGLRRRL
SAAWLLTTVL LLVGALLSLL KGFDWEEASL LTFTAALLAL FRRSFYRPSR LLELPFSPVY
LAASACVVGA SVWLLLFAYQ DVPYSHQLWW QFTLDADAPR GLRAAMGSAV LLLVVALTWL
LRTARPVIHL PDDEEIQRAN RILQAGDQPD GGLALTGDKA LLFHPNGNAF LMYARRGRSL
VALYDPIGPA QERAEMIWQF RDLCDLHHAR PVFYQVRAEN LPFYMDIGLT ALKLGEEARV
DLRRFDIEAK GKEMKDLRYT WNRGGRDGLS LEIHEPGQAP MVELKEISDA WLGGKNVREK
GFSLGRFSLE YLQHFRIALV RYQGRPVAFA NLLETHSNEL ASLDLMRAHP QAPKLTMEFM
MIGLILHYKS HGYGRFSLGM VPLSGLQPRR GAPLAQRLGS MVFRRGEQLY NFQGLRRFKD
KFQPDWEPRY MAVPAGLDPL VALADTAALI AGGLTGLVKR