Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4013 |
Symbol | |
ID | 6112982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4436844 |
End bp | 4439486 |
Gene Length | 2643 bp |
Protein Length | 880 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641623807 |
Product | hypothetical protein |
Protein accession | YP_001750862 |
Protein GI | 170723174 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.144886 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGACC GTAACCCAGA ACACCAGGCA CCCATAGCCT CAACCCTGCC CACGGCTGCC CAGCGCTTGC CGTGGCTGGA GCGGGTGAGC CGCTGTCGCC AGCCCATCAC CCTGGCAGTT ACCTTGGCGC TGTTCGCAAT GGCACTGATA GCCTGCCGCC ACTTGCTCAG TGAACTGGAT ATCCATGCTC TGCACGATGC GATGCTAAGC GTGCCCACCC ACTCGCTGGC CGGCGCGCTA CTCGCTGCGG TTATCGGGTT CGTGATCCTG CTTGGATATG AATGGTCTGC CTGCCGTTAT GCCGCCGTGA AGTTGCCTAG GCGTACGCTT CTGTTAGGCG GTTTCAGCGC ATTTGCCATT GGTAACGCTA TTGGCTTGTC GATGCTCTCG GGCGGTTCGG TGCGCTATCG CCTGTATGCT CGAGAAGGCC TGGGCGCTGT CGAAGTCGCG CGCATGACAG TGTTCGCCAG CCTTTCTTTG GGCTGCGCCC TGCCCCCTCT GGCGGCACTG GCCACGTTGA GCAACTTGCC AGCTGCGGCT ACCGCCCTGC ACCTGCCCAC CCCTGTACTG GCCACAGTCG CTATGGGCGT GCTTGCACTG ACCGCCGTCC TGGTGACTGG CCTGTATCGC CGACGCCTGG CAGAGCAGCC GCTACCAGAC AGCCTGCTGG TGCAACTGGG GCGCCGGACG CTGCGCCTGC CTGGCGCACG CCTGGCAGCA CTGCAACTGG TAATCACCGC GCTGGATGTA GCCGCCGCCG CGACCGTCCT TTACCTGCTG CTCCCAGAAG CCCCTCCGTT CGGCGCGTTC GTCCTCGTCT ATCTGCTGGC CCTGGCTGGC GGTGTACTTA GCCATGTGCC TGGCGGCATC GGGGTGTTCG AGGCAATTCT GCTCGCAGCC TTCGCCAATC AGCTCGGCGC CGCGCCACTG GCCGCCGCAC TGCTGCTGTA CCGCTTGATC TATGTAGTAC TGCCTTTGCT GGTGGCCTGT GCGCTGCTGC TGGCCAACGA AGCTAGGCGC CTGCTGTTTG CGCAGCAGGC GCTCAAGGCC GCCTCCGGGC TGGCTGCACC GGTGCTGGCG ATCCTCGTGT TTCTCTCCGG TGTGGTGCTG TTGTTCTCCG GCGCCACACC GGAAATCGAC ATCCGCCTGG AACACATGGG CTTTCTGGTG CCGCACCGCC TCATCGATGC CTCGCACTTC GGTGCCAGCC TGATTGGCGT GCTGTGCCTT TTGCTGGCCC AGGGCTTGCG CCGACGCCTG TCTGCCGCCT GGCTACTGAC TACCGTACTG CTCCTGGTTG GCGCACTGCT GTCGCTGCTC AAGGGCTTCG ACTGGGAAGA GGCCAGCCTG CTGACCTTCA CCGCTGCCCT GCTCGCGTTG TTCCGCCGTT CGTTCTACCG CCCAAGCAGG CTGCTGGAAC TGCCGTTTTC CCCGGTGTAC CTGGCAGCGA GTGCTTGCGT GGTCGGTGCT TCGGTGTGGC TACTGCTGTT TGCCTACCAG GATGTGCCCT ACAGCCATCA GCTGTGGTGG CAGTTCACGC TTGACGCCGA TGCCCCACGC GGCCTGCGCG CCGCCATGGG CAGCGCGGTA CTGTTGCTGG TCGTGGCCCT GACCTGGCTG CTGCGCACTG CCCGGCCAGT CATCCACCTG CCAGACGACG AGGAGATACA GCGCGCCAAC CGCATCCTGC AGGCTGGCGA CCAACCTGAC GGCGGCCTGG CGCTGACCGG TGACAAGGCC CTGCTGTTTC ACCCCAATGG CAACGCCTTT TTGATGTACG CGCGCCGGGG CCGCAGCCTG GTGGCCCTGT ACGACCCGAT CGGCCCGGCC CAGGAACGTG CCGAGATGAT CTGGCAATTC CGCGATCTGT GCGACCTGCA CCACGCCCGC CCGGTGTTCT ACCAGGTGCG TGCGGAGAAT CTGCCGTTCT ACATGGACAT CGGCCTGACC GCACTCAAGC TCGGCGAAGA AGCCCGAGTC GACTTGCGCC GCTTCGACAT CGAAGCCAAA GGCAAGGAAA TGAAAGACCT GCGCTACACC TGGAACCGCG GCGGCCGCGA TGGCCTGAGC CTGGAGATAC ATGAACCCGG CCAGGCCCCC ATGGTTGAGC TCAAGGAAAT CTCGGATGCC TGGCTCGGCG GCAAGAACGT GCGCGAAAAA GGCTTCTCGC TGGGGCGCTT CAGCCTTGAG TACCTGCAGC ATTTTCGCAT CGCCCTGGTT CGCTACCAGG GCCGGCCGGT GGCGTTTGCC AACCTGCTTG AAACTCACAG CAACGAACTG GCCAGCCTCG ATCTGATGCG TGCCCACCCC CAGGCGCCGA AGCTGACCAT GGAATTCATG ATGATCGGCC TGATCCTGCA CTACAAAAGC CATGGGTACG GCCGTTTCAG CCTGGGCATG GTACCGCTTT CCGGCTTGCA GCCACGGCGC GGCGCCCCCT TGGCCCAGCG CCTGGGCTCG ATGGTGTTCC GTCGCGGTGA ACAGCTTTAC AACTTCCAAG GGCTACGCCG CTTCAAGGAC AAGTTCCAAC CGGACTGGGA ACCCCGCTAC ATGGCTGTGC CGGCCGGGCT CGACCCGCTG GTGGCACTGG CCGACACTGC CGCCCTGATT GCGGGCGGCC TGACTGGATT GGTGAAACGT TGA
|
Protein sequence | MTDRNPEHQA PIASTLPTAA QRLPWLERVS RCRQPITLAV TLALFAMALI ACRHLLSELD IHALHDAMLS VPTHSLAGAL LAAVIGFVIL LGYEWSACRY AAVKLPRRTL LLGGFSAFAI GNAIGLSMLS GGSVRYRLYA REGLGAVEVA RMTVFASLSL GCALPPLAAL ATLSNLPAAA TALHLPTPVL ATVAMGVLAL TAVLVTGLYR RRLAEQPLPD SLLVQLGRRT LRLPGARLAA LQLVITALDV AAAATVLYLL LPEAPPFGAF VLVYLLALAG GVLSHVPGGI GVFEAILLAA FANQLGAAPL AAALLLYRLI YVVLPLLVAC ALLLANEARR LLFAQQALKA ASGLAAPVLA ILVFLSGVVL LFSGATPEID IRLEHMGFLV PHRLIDASHF GASLIGVLCL LLAQGLRRRL SAAWLLTTVL LLVGALLSLL KGFDWEEASL LTFTAALLAL FRRSFYRPSR LLELPFSPVY LAASACVVGA SVWLLLFAYQ DVPYSHQLWW QFTLDADAPR GLRAAMGSAV LLLVVALTWL LRTARPVIHL PDDEEIQRAN RILQAGDQPD GGLALTGDKA LLFHPNGNAF LMYARRGRSL VALYDPIGPA QERAEMIWQF RDLCDLHHAR PVFYQVRAEN LPFYMDIGLT ALKLGEEARV DLRRFDIEAK GKEMKDLRYT WNRGGRDGLS LEIHEPGQAP MVELKEISDA WLGGKNVREK GFSLGRFSLE YLQHFRIALV RYQGRPVAFA NLLETHSNEL ASLDLMRAHP QAPKLTMEFM MIGLILHYKS HGYGRFSLGM VPLSGLQPRR GAPLAQRLGS MVFRRGEQLY NFQGLRRFKD KFQPDWEPRY MAVPAGLDPL VALADTAALI AGGLTGLVKR
|
| |