| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4010 |
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| Symbol | |
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| ID | 6112976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4432097 |
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| End bp | 4433812 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641623801 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001750859 |
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| Protein GI | 170723171 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.550973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACCA GTCAATATTT GCTCGCCACC CAGAAAGAAA CCCCTGCCGA CGCAGTGGTC
ATCAGCCATC AGCTCATGCT GCGTGCCGGC ATGATCCGCA AGCTGGCTTC CGGCCTGTAC
ACCTGGCTGC CGATGGGCTT GCGGGTAATG CGCAAGGTCG AAGCCGTGGT GCGCGAGGAA
ATGAACGCCG CCGGCGCCCT GGAAGTGCTG ATGCCCAGCA TCCAGCCCGC CGAGCTGTGG
CAGGAGTCCG GCCGCTGGGA ACAGTACGGC CCTGAGCTGC TGCGCCTGAA AGACCGCCAT
CAGCGCGACT TCTGCGTCGG TCCGACCCAC GAAGAGGTCA TCACCGACCT GGCCCGCAAT
GAGCTGTCCA GCTATAAACA GCTGCCGCTC AACATGTACC AGATCCAGAC CAAGTTCCGT
GATGAGATCC GCCCACGTTT CGGCCTGATG CGCGGCCGCG AATTCATCAT GAAGGACGCC
TATTCCTTCC ATGCCGACCA GGCTTCCCTG CAGGAAACCT ACGACCGCAT GCACCAGGCG
TACAGCAACA TCTTCACCCG CCTGGGCCTG GACTTCCGCC CAGTGCAGGC CGATACCGGC
TCCATCGGCG GCAGCTACTC GCATGAATTC CACGTGCTGG CCGAGTCTGG CGAAGACGAC
GTGATCTTCA GCGACAGCTC CGATTATGCC GCCAACATCG AGAAGGCCGA GGCCATCCCG
CGCGAAACTG CGCGTCTGGC CCCTACCGAG GAGTTGCGCC TGGTGGATAC GCCAGACGCC
AAGACCATCG CCCAGCTGGT CGAGAACTAC GGGCTGCCGA TCGAAAAGAC CGTCAAGACC
CTGATTGTAC GCGGCGCCGA GGAAGGCAAG CTGGTCGCCC TGATCGTCCG TGGCGACCAC
GAACTCAACG AGATCAAGGC CGCCAAGCTG GAACAGGTCG CCGACCCGCT GGTCATGGCC
ACCGATGCCG AGCTGCGCGA AGCCATTGGT GCCGGCGCCG GCTCCCTCGG CCCGCTGAAC
CTGCCACTGG AATGCATCAT CGACCGCTCG GTTGCCCTGA TGAGCGACTT CGGCATCGGT
GCGAACATCG ATGACAAGCA CTACTTCGGC GTCAACTGGG AGCGCGACCT GCCGGTCCCA
CAGGTTGCCG ACCTGCGTAA CGTCGTCGAG GGCGACCCGA GCCCGGATGG CCAAGGCACT
CTGGTGATCA AGCGCGGCAT CGAAGTCGGC CACATCTTCC AGCTCGGCAC CAAGTACAGC
GAGGCACTCA AGTGCCAGGT ACTGGGTGAG AACGGCAAGC CAGTGGTGCT GTCCATGGGT
TGCTACGGCA TCGGCGTATC CCGCGTGGTC GCCGCCGCCA TCGAGCAGAG CTACGACGAC
AAAGGCATCA TCTGGAATGA CGCCCTGGCA CCTTTCCAGA TCGCCCTGGT ACCGCTGCGC
TACGAAACCG ACGTGGTTCG CGAGGCCACC GACAAGCTGT ATGCCGAACT GACGGCCGCA
GGCTTTGAAG TACTGCTGGA CGACCGCGAC AAGAAGACCA GCCCAGGCAT CAAGTTCGCC
GATATGGAGC TGATCGGTAT TCCGCACCGC ATCGTCGTCA GCGACCGCGG CCTGGCCGAC
GGCAACCTGG AATACAAGCA CCGCACCGAA CAGGATGCTC AAGCGCTGCC ACTCAATGAA
GTGCTGACCT TCCTGCAGGC CCGCGTTCGC CGCTGA
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| Protein sequence | MRTSQYLLAT QKETPADAVV ISHQLMLRAG MIRKLASGLY TWLPMGLRVM RKVEAVVREE
MNAAGALEVL MPSIQPAELW QESGRWEQYG PELLRLKDRH QRDFCVGPTH EEVITDLARN
ELSSYKQLPL NMYQIQTKFR DEIRPRFGLM RGREFIMKDA YSFHADQASL QETYDRMHQA
YSNIFTRLGL DFRPVQADTG SIGGSYSHEF HVLAESGEDD VIFSDSSDYA ANIEKAEAIP
RETARLAPTE ELRLVDTPDA KTIAQLVENY GLPIEKTVKT LIVRGAEEGK LVALIVRGDH
ELNEIKAAKL EQVADPLVMA TDAELREAIG AGAGSLGPLN LPLECIIDRS VALMSDFGIG
ANIDDKHYFG VNWERDLPVP QVADLRNVVE GDPSPDGQGT LVIKRGIEVG HIFQLGTKYS
EALKCQVLGE NGKPVVLSMG CYGIGVSRVV AAAIEQSYDD KGIIWNDALA PFQIALVPLR
YETDVVREAT DKLYAELTAA GFEVLLDDRD KKTSPGIKFA DMELIGIPHR IVVSDRGLAD
GNLEYKHRTE QDAQALPLNE VLTFLQARVR R
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