Gene PputW619_4008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4008 
Symbol 
ID6112974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4429490 
End bp4429987 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content61% 
IMG OID641623799 
Producthistidine triad (HIT) protein 
Protein accessionYP_001750857 
Protein GI170723169 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCGC AGACGAAGCA GGGTATCCTT GCGGCATTGA CCCGCACGCC GGGGCCCTTT 
CGTTGGTGGA GGTTTTCAGT GTTTGAGATT GATTCGCGTT TGCAGCAGGA CTCTTTGATC
CTTGGGGATT TTCCGCTGTG CCGTCTGCTG CTTAGCAAGG ATGCCAATTA CCCTTGGTTC
ATCCTGGTGC CCAAGCGTGC CGGCGTGAGC GAACTGTTCG ACCTGAGCCA GGACGATCAG
GCGCAGCTGT GGAAAGAAAC AACCTGCCTG GCCGAAGCGC TCAAGGGCGA GTTCGCGGCG
GATAAAATGA ACGTTGCCAC GCTGGGTAAT GTGGTCGGCC AGCTGCACAT GCACGTGATT
GTCCGTCGCC ATGGGGATGC CGCCTGGCCG GCGCCGGTCT GGGGCAGGGT ACCCCCTGTC
GAATACGGGC CGGGGCAGGT CGATGCCATT CGCCAGCGCC TGCGCGCCCT GCTCAATGAT
GCATATGAGG AGGCCTGA
 
Protein sequence
MLAQTKQGIL AALTRTPGPF RWWRFSVFEI DSRLQQDSLI LGDFPLCRLL LSKDANYPWF 
ILVPKRAGVS ELFDLSQDDQ AQLWKETTCL AEALKGEFAA DKMNVATLGN VVGQLHMHVI
VRRHGDAAWP APVWGRVPPV EYGPGQVDAI RQRLRALLND AYEEA