Gene PputW619_4003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4003 
Symbol 
ID6112969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4427060 
End bp4427281 
Gene Length222 bp 
Protein Length73 aa 
Translation table11 
GC content59% 
IMG OID641623794 
ProductFmdB family regulatory protein 
Protein accessionYP_001750852 
Protein GI170723164 
COG category[S] Function unknown 
COG ID[COG2331] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTTT ATGACTATCA ATGTGCATCC TGCGATCACC GGCTGGAAGC GCTGCAGAAG 
ATCAGCGCAG CGCCGCTGAC CGACTGCCCG GCCTGCCAGG CGCCGGCATT GAAGAAACTG
TTATCGGTCC CCGGCTTTCG TCTGAGCGGT AGTGGCTGGT ATGAAACCGA CTTCAAGACC
GGGGCAAAAA AGAATCTGGC AGGCGGCGAC AAGGCCGACT GA
 
Protein sequence
MPLYDYQCAS CDHRLEALQK ISAAPLTDCP ACQAPALKKL LSVPGFRLSG SGWYETDFKT 
GAKKNLAGGD KAD