| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4001 |
|---|
| Symbol | |
|---|
| ID | 6112967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4424331 |
|---|
| End bp | 4425077 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641623792 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001750850 |
|---|
| Protein GI | 170723162 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0217] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGTC ATTCCAAGTG GGCGAACATC AAGCACCGCA AAGAGCGCCA GGATGCCAAG
AGAGGCAAGA TCTTCACCAA GTGGATCCGT GAGCTGACCG TCGCTGCCAA GCAGGGTGGT
GGCGATCCGG CCTCCAATCC GCGCTTGCGC CTGGCGCTGG ACAAGGCCCT GGGTGCCAAC
ATGAGCCGCG ATATCATCGA CCGCGCCGTG GCCCGTGGTG CTGGCACCAA CGAAAGCGAT
AACGTTGAAG AGCTGAGCTA CGAGGGTTAC GGCCCGGGCG GGGTGGCGAT CATGGTCGAG
GCCATGACCG ACAACCGCAA CCGTACCGCG GCCGCCGTGC GGCATGCCTT CACCAAGTGT
GGCGGCAACC TCGGTACCGA TGGCTCGGTG GCCTACCTGT TCGAGCGCAA GGGGCAGATC
AGCTTCGCGC CGGGTGTGGA CGAAGATGCC CTGATGGAAG CCGCCATGGA AGCCGACGCC
GACGATGTCG TGGCCAACGA AGACGGTTCG TTCGAGGTGT TCACCTCGTT CAACAGCTTC
TATGCCGTGC GTAATGCCCT GGAGGAAGCC GGCTTCAAGG CCGCAGATGC GGAAATCGTC
ATGCAGCCGA CCACCAGTGC CGAGCTGGAT CAGGAGGGGG CGGAGAAAGT GCTCAAGCTG
ATCGACATGC TCGAAGACCT GGATGACGTG CAGAACGTCT ACTCCAATGC ACAGATTTCC
GACGAGATCA TGGAAAAACT CGGCTAA
|
|---|
| Protein sequence | MAGHSKWANI KHRKERQDAK RGKIFTKWIR ELTVAAKQGG GDPASNPRLR LALDKALGAN
MSRDIIDRAV ARGAGTNESD NVEELSYEGY GPGGVAIMVE AMTDNRNRTA AAVRHAFTKC
GGNLGTDGSV AYLFERKGQI SFAPGVDEDA LMEAAMEADA DDVVANEDGS FEVFTSFNSF
YAVRNALEEA GFKAADAEIV MQPTTSAELD QEGAEKVLKL IDMLEDLDDV QNVYSNAQIS
DEIMEKLG
|
|---|
| |