Gene PputW619_3997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3997 
Symbol 
ID6112963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4421263 
End bp4421715 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content61% 
IMG OID641623788 
Producttol-pal system-associated acyl-CoA thioesterase 
Protein accessionYP_001750846 
Protein GI170723158 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.666415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGC AAAATGGCCT GGAACCTTTC GCACACCGTT GTCGCGTCTA TTACGAAGAT 
ACCGATGCCG GTGGCGTGGT GTATTACGTC AACTACCTGA AATTCATGGA GCGCGCGCGG
ACCGAGCGCC TGCGGCACCT GGGGTTTTCC CAGCAGCAAC TGGCCGGGGA GAACCTGTTG
TTCGTGGTCC ACTCAAGCGA AGCGCGTTAT CACGCGCCGG CGCGCCTGGA CGACGAACTT
CGGGTGACCG CGCAAGTACT TGAACTCAAT CGCGCCAGCC TGCGTTTCGT GCAGCAGGTC
TGGCGGGAAA AGGATGAAAC GCTGCTCTGC GAAGGGCAGT TCCTGGTGGC GGCCGTGCGC
GCCGACACTT TCAAACCCCG AGCCATACCC CCCAAGCTGC GCGACGCCTT TGTGGCGGAC
GGCTCGGGTA CTCAATCGAA TGCAGGAGAA TAA
 
Protein sequence
MRAQNGLEPF AHRCRVYYED TDAGGVVYYV NYLKFMERAR TERLRHLGFS QQQLAGENLL 
FVVHSSEARY HAPARLDDEL RVTAQVLELN RASLRFVQQV WREKDETLLC EGQFLVAAVR
ADTFKPRAIP PKLRDAFVAD GSGTQSNAGE