| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3993 |
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| Symbol | tolB |
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| ID | 6112959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4417724 |
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| End bp | 4418995 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641623784 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001750842 |
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| Protein GI | 170723154 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.213865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTGCT GCGTGGCAGG CATGGCCATG GCAGAGGAAA AGAACATCCT GGTCACCAGC
GGCAGCGATC GGGCCACGCC CATCGCGGTA GTGCCGTTCG GTCTGCAGGG TGGCAGTGTG
CTGCCGGAAG ACATGGCCGA TATCATCGGC AATGACCTGC GCAACTCCGG TTACTACTCG
CCCATCCCAC GGCAGAACAT GATCAGCCAG CCTACCCAGG CCAGCGAAGT GATCTTCCGT
GACTGGAAAG CCTTGGGCGC CCAGTACGTG ATGGTCGGCA GCATCGTGCC GTCGGGCGGT
CGCCTGCAGG TGCAGTACGC GCTGTTCAAC GTCGCCACCG AGCAGCAAGT GCTGACCGGC
AGCGTTGCCG GCAGCGTCGA CCAACTGCGC GACATGTCGC ACTACATCGC CGACCAGTCG
TTCGAGAAGC TCACCGGCAT CAAGGGTGCG TTTTCCACTC GCATGCTGTA CGTGACCGCC
GAGCGCTTCT CGACCAACAA TACCCGCTAC ACCCTGCAGC GTTCGGACTA CGACGGTGCG
CGTGCAGTGA CCTTGCTGCA GTCGCGTGAG CCTATCCTGT CGCCACGTTT CGCGCCGGAC
GGCAAGCGTA TCGCCTATGT CTCGTTCGAG CAGAAGCGTC CGCGCATTTT CATCCAGCAC
ATCGACACCG GCCGCCGCGA ACAGGTCACC AACTTCGAAG GCCTCAATGG TGCTCCGGCC
TGGTCGCCGG ATGGTTCGCG CCTGGCGTTC GTGCTGTCCA AGGACGGCAA CCCGGACATC
TACGTGATGA ACGTGGCTTC GCGCCAGATC AGCCGTGTCA CTGCCGGCCC GGGTATCAAT
ACCGAGCCGT TCTGGGGCAA GGATGGCAAC ACTCTGTACT TCACCTCCGA CCGTGGCGGC
AAGCCGCAGA TCTACAAACA GTCGGTCAGT GGTGGTAGCG CCGAGCGTGT GACGTTCGTA
GGTAACTACA ACGCCAACCC GAAACTTTCG GCGGACGAAA AGACGCTGGT AATGATCCAT
CGTCAGCAGG GATTCACCAA CTTCAAAGTG GCGGCACAAG ACTTGCAGAG AGGAAGTGTA
AAGATTCTCT CGGAAACAAG TCTTGATGAG TCTCCCACTG TTGCGCCAAA CGGCACCATG
CTAATCTACG CCACCCGCCA GCAGGGCCGG GGAGTCTTGA TGCTCGTGTC GCTTAATGGC
CGCGTGAGGC TCCCACTTCC TACCGCTCAA GGCGAAGTCA GAGAACCGTC CTGGTCCCCT
TACCTGAACT GA
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| Protein sequence | MLCCVAGMAM AEEKNILVTS GSDRATPIAV VPFGLQGGSV LPEDMADIIG NDLRNSGYYS
PIPRQNMISQ PTQASEVIFR DWKALGAQYV MVGSIVPSGG RLQVQYALFN VATEQQVLTG
SVAGSVDQLR DMSHYIADQS FEKLTGIKGA FSTRMLYVTA ERFSTNNTRY TLQRSDYDGA
RAVTLLQSRE PILSPRFAPD GKRIAYVSFE QKRPRIFIQH IDTGRREQVT NFEGLNGAPA
WSPDGSRLAF VLSKDGNPDI YVMNVASRQI SRVTAGPGIN TEPFWGKDGN TLYFTSDRGG
KPQIYKQSVS GGSAERVTFV GNYNANPKLS ADEKTLVMIH RQQGFTNFKV AAQDLQRGSV
KILSETSLDE SPTVAPNGTM LIYATRQQGR GVLMLVSLNG RVRLPLPTAQ GEVREPSWSP
YLN
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