| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3991 |
|---|
| Symbol | |
|---|
| ID | 6112957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4416350 |
|---|
| End bp | 4417165 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641623782 |
|---|
| Product | tol-pal system protein YbgF |
|---|
| Protein accession | YP_001750840 |
|---|
| Protein GI | 170723152 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.721689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATGT GCCGTCGTGC TGTAACCGTC CTCGCACTCA GCCTTCCGCT TTCGGCGTGG
GCTGCGGTTC CTGTAGTAGA TGACAACGCA GGTGCTTACC CACCTTCGGG TTATGGCACG
AGCGGCGCCT ATGCCGGGGC AGGGGCTTCG ACCCCTGCCT CAGCACAGGG CCAGCTGTTC
ATGCAGCTGC AACAGATGCA GGACCAGATA TCCCGCCAGC AAGGCATCAT CGAAGAGCTG
CAAAACGATG TCGCCCGCAT GAAGCAGGAA AGCCTGGAGC GTTACCAGGA TCTGGACCGC
CGCATCAACA GTGGTGGCGC GCCTGCCGCG ACCCCCGATA ATTCCTCCAC CGGTGGTGCA
CCCGATGCCG CCGCCGGTGC AGCAGCAGGC GCCGCTGGCG CTGCTGCACA GCAACCGGCC
GCCAACAGCG AGCCGGGTGA TCCGGCGAAA GAGAAGCTCT ATTACGATGC CGCTTTCGAC
CTGATCAAGC AGAAGGACTT CGACAAGGCC AGCCAGGCGT TCGGCGCCTT CCTGCGCAAG
TACCCGAACA GCCAGTACGC AGGCAACGCC CAGTATTGGC TGGGTGAGGT GAACCTGGCC
AAGGGTGACC TGCAAAGTGC CAGCCAAGCC TTTGCCCAGG TTAGCCAGAA GTACCCCAAG
CACAGCAAGG TACCGGACTC CCTGTACAAG CTGGCCGACG TCGAGCGTCG CATGGGCCAT
ACCGACAAGG TCAAAGGCAT CCTGCAGCAA GTCATCACCC AGTACCCCGG CACTTCCGCC
GCACAGCTGG CGCAGCGTGA CCTGCAGAAG CTCTAA
|
|---|
| Protein sequence | MRMCRRAVTV LALSLPLSAW AAVPVVDDNA GAYPPSGYGT SGAYAGAGAS TPASAQGQLF
MQLQQMQDQI SRQQGIIEEL QNDVARMKQE SLERYQDLDR RINSGGAPAA TPDNSSTGGA
PDAAAGAAAG AAGAAAQQPA ANSEPGDPAK EKLYYDAAFD LIKQKDFDKA SQAFGAFLRK
YPNSQYAGNA QYWLGEVNLA KGDLQSASQA FAQVSQKYPK HSKVPDSLYK LADVERRMGH
TDKVKGILQQ VITQYPGTSA AQLAQRDLQK L
|
|---|
| |