Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3989 |
Symbol | |
ID | 6112955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4414852 |
End bp | 4415526 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641623780 |
Product | exsB protein |
Protein accession | YP_001750838 |
Protein GI | 170723150 |
COG category | [R] General function prediction only |
COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
TIGRFAM ID | [TIGR00364] exsB protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.402468 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAGA AACGCGCAGT AATCCTGCTG TCCGGCGGCC TCGACTCGGC CACTGTCGTC GCCATGGCCA AGGCTGAAGG CTATAGCTGC TACACCATGA GCTTCGACTA TGGCCAGCGC CATCGTGCTG AATTGAACGC TGCTGCGCGG GTCGCTCGTG ACTTGGGCGT CGTTGAGCAC AAGGTCATCG GCTTGAACCT CGATGGCATC GGTGGTTCGG CGCTGACCGA CAGCAGCATC GATGTACCGG AAACCCCGGG CGAGGGTATT CCAGTGACCT ATGTGCCGGC ACGCAATACC GTATTCCTGT CCTTGGCCCT GGGCTGGGCA GAAGTGCTGC AAGCGCGCGA TATCTTTATC GGCGTCAATG CCGTGGACTA CTCGGGCTAC CCTGATTGCC GCCCAGAGTT CGTCGAAGCG TTCGAACGCA TGGCCAACCT CGCGACCAAG GCCGGTGTCG AGGGGCAGGG CTTCCGGATC CAGGCGCCAC TACAGAACAT GAGCAAGGCG CAGATCGTGC AGGCCGGTAT GGCCCGTGGT GTGGATTACA GCCTGACAGT CTCCTGCTAC CAGGCCGACG ATGAGGGCCG CGCCTGTGGC AAGTGCGACA GCTGCCGCCT GCGCGCCGAC GGCTTCAAGG CTGCCGGAGT AGAAGACCCA ACCCGTTATT TTTGA
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Protein sequence | MTEKRAVILL SGGLDSATVV AMAKAEGYSC YTMSFDYGQR HRAELNAAAR VARDLGVVEH KVIGLNLDGI GGSALTDSSI DVPETPGEGI PVTYVPARNT VFLSLALGWA EVLQARDIFI GVNAVDYSGY PDCRPEFVEA FERMANLATK AGVEGQGFRI QAPLQNMSKA QIVQAGMARG VDYSLTVSCY QADDEGRACG KCDSCRLRAD GFKAAGVEDP TRYF
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