Gene PputW619_3989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3989 
Symbol 
ID6112955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4414852 
End bp4415526 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content61% 
IMG OID641623780 
ProductexsB protein 
Protein accessionYP_001750838 
Protein GI170723150 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.402468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGA AACGCGCAGT AATCCTGCTG TCCGGCGGCC TCGACTCGGC CACTGTCGTC 
GCCATGGCCA AGGCTGAAGG CTATAGCTGC TACACCATGA GCTTCGACTA TGGCCAGCGC
CATCGTGCTG AATTGAACGC TGCTGCGCGG GTCGCTCGTG ACTTGGGCGT CGTTGAGCAC
AAGGTCATCG GCTTGAACCT CGATGGCATC GGTGGTTCGG CGCTGACCGA CAGCAGCATC
GATGTACCGG AAACCCCGGG CGAGGGTATT CCAGTGACCT ATGTGCCGGC ACGCAATACC
GTATTCCTGT CCTTGGCCCT GGGCTGGGCA GAAGTGCTGC AAGCGCGCGA TATCTTTATC
GGCGTCAATG CCGTGGACTA CTCGGGCTAC CCTGATTGCC GCCCAGAGTT CGTCGAAGCG
TTCGAACGCA TGGCCAACCT CGCGACCAAG GCCGGTGTCG AGGGGCAGGG CTTCCGGATC
CAGGCGCCAC TACAGAACAT GAGCAAGGCG CAGATCGTGC AGGCCGGTAT GGCCCGTGGT
GTGGATTACA GCCTGACAGT CTCCTGCTAC CAGGCCGACG ATGAGGGCCG CGCCTGTGGC
AAGTGCGACA GCTGCCGCCT GCGCGCCGAC GGCTTCAAGG CTGCCGGAGT AGAAGACCCA
ACCCGTTATT TTTGA
 
Protein sequence
MTEKRAVILL SGGLDSATVV AMAKAEGYSC YTMSFDYGQR HRAELNAAAR VARDLGVVEH 
KVIGLNLDGI GGSALTDSSI DVPETPGEGI PVTYVPARNT VFLSLALGWA EVLQARDIFI
GVNAVDYSGY PDCRPEFVEA FERMANLATK AGVEGQGFRI QAPLQNMSKA QIVQAGMARG
VDYSLTVSCY QADDEGRACG KCDSCRLRAD GFKAAGVEDP TRYF