| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3988 |
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| Symbol | |
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| ID | 6112953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4412130 |
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| End bp | 4414388 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641623778 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001750837 |
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| Protein GI | 170723149 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG TACAAACCCA GAATATCGAA ACTGCCGATG TGATCGTGGT GGGCGCAGGC
ATGGCCGGCA GCGTCATGGC CTATCAGTTG GGCCTGGCCG GCTTGAAAGT GCTGGTGCTC
GAGTCGGGCC CGGCAATTCC GCCGAACCGC AGCGAGTATC TGGAGCGTTT CTACACCGCC
GTGCTCAAGT CGCCCGAGTC GCCATACCCG CCGGAGCAGA CCGAGCAGAC CCCGGCCACC
CAGTTCGCTC CGCGCGCGAC TATCCAGGAT TTGATCACCG CCGGCAGCAC CGACCCGAAC
AAAGTGCAGA AAAGCTACCT GGTACAGAAG GGGCCGCAGC TGTTCGCCAG CACCTACGAA
CGGGTAGGCG GCGGCACCAT GTGGCACTGG ATGGGCACGG CCCTGCGCCT GTTGCCCAAC
GACTTTCGCA TGCGCACTGC GTACAACGTC GGGGTCGACT GGCCGATCAG CTACGAAGAC
CTGCAGACCG CCTACTGCCG CGCCGAGGAG GAGATGGGCG TGTCCGCCGA TGTCGCCTCG
CAGACCTACC TGGGCGTGAC CTTCCCGCAG GGGTATGAAT ACAGCATGCA CGGCATCCCG
CCTTCGCTGG TAGACCAGGG CTTGAGCAAA AACGTGACGG GCACGGTGTA CCAGAGTCCG
GAGAAGGCGC CCGACGGCAA GCCGTACCCA GGTGTCACCC TCAACGTCCG GCAGACCCCG
GCAGGGCGCA ACTCGCAGAG CGACAACGGC CGACGGGTGT GCGCTGGAAA CACCAGCTGC
ACGCCGATCT GCCCCATCCA GGCCAAGTAC GACGCCACCG TCACAATGGC CAAGGCACTG
GATACCGGCA ACGTGCGCAT CCTCTACCAG ACCGTGGCGA GCCAGGTGCA GGTCGATGCC
CATGGGGTCA CGGGTATCGA TTTCATCCAG TACCAGAACA ATGGCACGCG CCAGAACGGC
ACGGCCCAGG GCAAGCGCTA CGTGATCGCC GCCCATGCTA TCGAAACGCC AAAGCTGTTA
CTCAACTCCA TCGGCCCCAA CAGCCCTAAA GGGGTCGCCA ACAGCAGCGG CCAGGTGGGC
CAGGCGCTGG CTGACCACCC GGTGTACCTG GCCTGGGGCC TGATGCCCGA AGGCAAGCCG
CTGTTCCCGT TCCGCGGGCC GTTGTCCACC TCGGGGATCG AGGACATGCG CGATGGCCCG
TTCCGCAGCC AGCGCGCCGC CTGGCGTATC GAGATCGGCA ACGAGGGTTG GAACTGGTCG
GTAAACGACC CCTACGCCTC TGTCTGCGAT TTCATCGACG GCACCAACAA CGGCGGCGCT
AACCCCAACA AGCTGGCGTT GTCCGGCCAG GCGCTGGTGC AGCAGCTCAA CAGCGTGCTG
ACCCGCCAGT TCCGTCTGGG CTTCTTGATC GAGCAGGTGG AGAAAGACCC TGACCATGCG
CTGTGCCGGG TGGAAAGGAG CACGGAGTTC ACCGATGGTC TGGGCCTGCC CCGGCCGCAG
ATCACCTACG AACTGTCCGA CTACACCAAG GAGGGCTTCA AGCAAGCGCG CCTGGCCGCC
ACGCATATCA TCACCGAGCT GATGGGCGCC ACCGAGCTGA CCAACCTGAA CCCTAAACTC
GAGCCCGGCT CGCAAACGGT GTTCGAGTAC GACGGCCATA ACTACGCGTT CTTCGGCGCT
GGCCACCTGA TGGGCACCTA CCGCATGGGC TCGGACCGCA CCAAGTCGGT GGTGGACAAG
GACCAGCGCA GTTGGGACCA CCCCAACCTG TTCCTGGTCG GCGACGGCGT GTTCCCCACC
ACCGGCACCG CCAACCCGAC CTTGACCATT ACCGCGCTGA CCTTCCAGGC CGCCGACGTG
GTGGCCAGCG ACCTGCTCAA GCGCACGGTG CAGGTGCAGG CCAACCAGGC ATGGCAGGGC
ACGGGCATGC AGGTCAATGG GCAGAGCTGG CAGTTGGCGG TGTGTACAGG CGGGCAGTGG
ACGGCCAACC CGGCCACCGG CATGGTTGGC GCACAGGGCA ACCCAGCGTT GATCGCCAAG
CCGGGCTACA CCCTGCCGGG GCAGAACGAA GGGGCGTTGA TCGGGCGCAT CGGCAGCAAC
GGCGTGCCGT TCCTGGTGGG TGATCAGGAG CAATTGCCGC GTGGCCAGCA GGGTGAGTTG
CAGCTGTGCA TCAATGACGA CCTGGCTGGG CGCTATGGGG CTGGCCTGAG CGATAACCTG
GGCAGCCTGT CGGTGGAGGT GCGTTTCGGG GCGGTGTAG
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| Protein sequence | MSNVQTQNIE TADVIVVGAG MAGSVMAYQL GLAGLKVLVL ESGPAIPPNR SEYLERFYTA
VLKSPESPYP PEQTEQTPAT QFAPRATIQD LITAGSTDPN KVQKSYLVQK GPQLFASTYE
RVGGGTMWHW MGTALRLLPN DFRMRTAYNV GVDWPISYED LQTAYCRAEE EMGVSADVAS
QTYLGVTFPQ GYEYSMHGIP PSLVDQGLSK NVTGTVYQSP EKAPDGKPYP GVTLNVRQTP
AGRNSQSDNG RRVCAGNTSC TPICPIQAKY DATVTMAKAL DTGNVRILYQ TVASQVQVDA
HGVTGIDFIQ YQNNGTRQNG TAQGKRYVIA AHAIETPKLL LNSIGPNSPK GVANSSGQVG
QALADHPVYL AWGLMPEGKP LFPFRGPLST SGIEDMRDGP FRSQRAAWRI EIGNEGWNWS
VNDPYASVCD FIDGTNNGGA NPNKLALSGQ ALVQQLNSVL TRQFRLGFLI EQVEKDPDHA
LCRVERSTEF TDGLGLPRPQ ITYELSDYTK EGFKQARLAA THIITELMGA TELTNLNPKL
EPGSQTVFEY DGHNYAFFGA GHLMGTYRMG SDRTKSVVDK DQRSWDHPNL FLVGDGVFPT
TGTANPTLTI TALTFQAADV VASDLLKRTV QVQANQAWQG TGMQVNGQSW QLAVCTGGQW
TANPATGMVG AQGNPALIAK PGYTLPGQNE GALIGRIGSN GVPFLVGDQE QLPRGQQGEL
QLCINDDLAG RYGAGLSDNL GSLSVEVRFG AV
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