Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3986 |
Symbol | |
ID | 6112951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4410297 |
End bp | 4411637 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641623776 |
Product | hypothetical protein |
Protein accession | YP_001750835 |
Protein GI | 170723147 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.956854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATAA CCCTGAAACG GTTGGCGTGC CTGGGAGCAA GCTTCACCAG CGCGCTTGCC ATGGCCGATG CGGCTAGCCC GCCAGTGCTT TCACCTGCGA TTCCCTTCGA CGTCACCGCT ACCCCACCCT TCACCCTGGA TAACCTGCAA CACGATTTCG ACGTGCTGTC GTGGCAGACA TTCGTTGCCC TGAACTGGCC CGCCAACGCC GACGGCAGCG CCAACACCTC GGCGAAGATG GGCGCGCCGG GGCAGACGGT TTGGGAGTCG TGGAAGGAGA GCTACGAGAT TTTCCTGCCC CAAGGCCAGA AGCCGGTCGC CTGGAACCAG AAGGCGCCGC TACCCGCCGC CTGCCAAGGC AAGGGTGACC TGCCCGTCCT GCAACAGATG GGCAAGGTCG CCGGTGTGCT CGACGAATTC ATTCAGCCGT TCAAGACCGG CCCACTGGTG GACCAGAACG GCACCTACAC GCGCAACGCG ATCATGGTCA ACCAGCCGAT GTTCGATGAC ATCGTCAACA ATGGCCTGTA CAGCAAGGAG GGCCAGCAAG CATTCCTGAG CAAGGCCGAG AACCGCATCG CATTCGCCTG CGGGTCGCAG AAGGCCGAGC AGGTCGGCGC GATCATGGTC AAGTCGGCCT GGAAGGTACT CGGCGGCAAC GACAACCCGC AGGACTTCCA CGCCGTCGAC GCCTTGGTCT ACACCCCCGG CAACGCCGAC CCGAACAAGG GCGCGGTGAT CCCCGAGTCG TGCAGCGCGC AGAAGGTCGG GCTGGTCGGT CTGCACATCG TGCACAAGAC CCAGGCCGCG CCGCAGTGGG TATGGTCGAG CTTCGAGCAC GTGCGCAACG TGCCGGAAAA GACCACACCG ATGAACGAGC GCAAGGGCCC CTACCTGTTC TACGACGCCC AAGCCAGCGA CCGCCCGGTG AACGAGCCGC CAGCGCAGCC GTGGGACCCA TCGAAGAAAG CCACGCCTTC GCAGATCGTG CGGGAAATCC CGCTCACCAC CGCGACACAC CAGCTCAACG CGCAGTGGCA AAGCGCGCTC AAGGGCACTG TGTGGGCCAA CTACCAGTTG ATCAGCACCC AGTGGCCGAC CGACCCCGCC GATGACTGCA AAGTACCGTC GCCAACCAAT CCGCTGGGCA CGCCTGCGCC GAACTTCCTG GCCAACGCCA CGCTGGAAAC CTACAACCAG GGCACTACGC CGCAGGCTTC GTCCAGTTGC ATGGAGTGCC ACAACAACGC GACCACCCGC GTGACCCAGT CACCGCGCAC CAGCTTCGCC GATTTCACCT TCCTGCTTGA ACGTGCCCAA TCCACTGGCG CCAAGGAGTG A
|
Protein sequence | MKITLKRLAC LGASFTSALA MADAASPPVL SPAIPFDVTA TPPFTLDNLQ HDFDVLSWQT FVALNWPANA DGSANTSAKM GAPGQTVWES WKESYEIFLP QGQKPVAWNQ KAPLPAACQG KGDLPVLQQM GKVAGVLDEF IQPFKTGPLV DQNGTYTRNA IMVNQPMFDD IVNNGLYSKE GQQAFLSKAE NRIAFACGSQ KAEQVGAIMV KSAWKVLGGN DNPQDFHAVD ALVYTPGNAD PNKGAVIPES CSAQKVGLVG LHIVHKTQAA PQWVWSSFEH VRNVPEKTTP MNERKGPYLF YDAQASDRPV NEPPAQPWDP SKKATPSQIV REIPLTTATH QLNAQWQSAL KGTVWANYQL ISTQWPTDPA DDCKVPSPTN PLGTPAPNFL ANATLETYNQ GTTPQASSSC MECHNNATTR VTQSPRTSFA DFTFLLERAQ STGAKE
|
| |