Gene PputW619_3980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3980 
Symbol 
ID6112945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4400566 
End bp4402002 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content65% 
IMG OID641623770 
Productpeptidase M48 Ste24p 
Protein accessionYP_001750829 
Protein GI170723141 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTAC TGCGCCCTAC CCTGTTGACG CTGGCCTGCC TGATGGCCCT TCCCGGCCAT 
GCTAGCGACC TGCCTTCACT GGGCGACGCC AGTTCCGCGA TCGTCTCGCC ACAGCAGGAG
CACCAGCTCG GGCGCGCCTG GCTCAGCCTG CTACGCGGCC AGGTCAACCA GCTGAACGAC
CCGCAGCTCA AGGACTACGT CGAAACCACC GTGTACCGCC TGGCCGAAAC CAGCCAGCTG
CAGGACCGTC GCCTGGAATT CATCCTAATC GACAGCCGTG AGCTGAACGC CTTCGCCGCC
CCCGGTGGCA TCGTCGGGGT CAACGGTGGT CTGTTCCTCA ACGCCCAGAC CGAGGGCGAA
TACGCCTCGG TACTGGCCCA CGAACTGGCG CACTTGTCGC AGCGCCACTT CGCCCGTGGC
GTCGAGGCCC AGCAACGCAT GCAACTGCCA ATGATGGCGG CACTGCTGGC CGGTATCGTA
CTGGCGGCAG GGGGCGCCGG CGATGCCGGC ATCGGCATGA TTGCCGGCAC CCAGGCGGCG
GCGATCCAGG AGCAGCGGCG CTTCTCGCGG CAGAACGAGC AGGAAGCCGA CCGCGTCGGT
ATCCAGAACC TGGAAAAGGC CGGTTACGAC CCGCGCAACA TGCCGACCAT GTTCGAGCGC
CTGGCGCGCC AGTACCGCTA CGACGCCAAA CCACCAGAAT TCCTGCTGAC TCACCCGGTG
ACCGAATCGC GTATCGCCGA CACCCGCAAC CGGGCCGAAC AGGCACCCCC AGGCGGCGTC
GAGGACAGCC AGCGTTATCA GTTGATCCGC GCCCGCGTTG CCCTGATCTA CGAAGGCACG
CCGGGCCTGG CGGCCAAACG CTTCCGTGCG CAGCTGGACG AAGACCCCAA GCTGGACGCC
GCCCGCTATG GTCTTGCCTT GGCGCAGATC AAAGGCGGCC AGCTCAACGA AGCGCGTGAG
AACCTGAAGC CCTTGCTGGC CAAGGCGCCC AACGACATCA CCTACAACCT GGCGCAGATC
GACCTGGACA TCACCAACAA CCGCTTGGCC GATGCGCAGC AGCGGGCGGA GCGCATGCAA
GGTTTGTATC CGGGCAACTA CCCGCTCAAG CAGGTGCGTG CCGACCTGCT GATCAAGCAG
AACAAGCCCG CCGAGGCCGA AAAGGTACTG AACGACCTGC TCAAGAACCG CCCGGATGAT
CCGGATGTGT GGTACGACAT GGCCGAAGTG CGTGGTTTGT CGGGCAATAC CATAGGCTTG
CACCGGGCGC GGGCAGAGTA CTTTACCCTG GTGGGGGACT TCGACCAGGC GATCCAGCAG
CTGGATTACG CCAAACGTCG TGCCGGCAGC AACTTCCCGC TGGCGTCACA GATCGACCAG
CGCCAGCGCG AGATCATGGA GCAGCGGCGC ATGGTGCAGG AGATGATGGG GCGGTAA
 
Protein sequence
MNLLRPTLLT LACLMALPGH ASDLPSLGDA SSAIVSPQQE HQLGRAWLSL LRGQVNQLND 
PQLKDYVETT VYRLAETSQL QDRRLEFILI DSRELNAFAA PGGIVGVNGG LFLNAQTEGE
YASVLAHELA HLSQRHFARG VEAQQRMQLP MMAALLAGIV LAAGGAGDAG IGMIAGTQAA
AIQEQRRFSR QNEQEADRVG IQNLEKAGYD PRNMPTMFER LARQYRYDAK PPEFLLTHPV
TESRIADTRN RAEQAPPGGV EDSQRYQLIR ARVALIYEGT PGLAAKRFRA QLDEDPKLDA
ARYGLALAQI KGGQLNEARE NLKPLLAKAP NDITYNLAQI DLDITNNRLA DAQQRAERMQ
GLYPGNYPLK QVRADLLIKQ NKPAEAEKVL NDLLKNRPDD PDVWYDMAEV RGLSGNTIGL
HRARAEYFTL VGDFDQAIQQ LDYAKRRAGS NFPLASQIDQ RQREIMEQRR MVQEMMGR