Gene PputW619_3971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3971 
Symbol 
ID6112935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4392912 
End bp4393934 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content62% 
IMG OID641623760 
Productintegrase family protein 
Protein accessionYP_001750820 
Protein GI170723132 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.164476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGAGC GTGTATTTCC CCCAAGCGTT CGCTATCATT CCGCCATGGC CTACTACGAG 
AAGCGCGGGG ACGCCTGGCG CGCCCAGATC CGCCGCAAAG GATATCCAAC CCTTTCCGCC
ACCTTTGACA CCAAGGCAGA AGCCCAGCGA TGGGCCGCCG AGATCGAGGG TGACATGTCG
CGTGCACGCT TCGTGGACAT GCGCGAGGCT GAGAGCACCA CGCTGGACGA GGCCCTGGAC
CGATACCTGT CTGAGGTGAC TTCTACCAAG AAGGGCGCCA AGCAGGAGCA AGTCCGCATC
AAGAAGTGGA AAGAACACAA GCTGGCCAGC AAAGGGCTGG CGGCCATCCG CTCGAGCGAC
ATGGCTGCCT ATCGCGATGC TGAGCTGAAG GAAGGGAAGT CGACGGCGAC AGTGCGCCTC
AACTTGGCAG TGATCAGCCA TCTCTTCACG GTGGCTACCA AGGAATGGGG TATCGAAGGA
TTGACCAACC CTTGCCGGGC GATCCGGATG CCGAAGGGCA GCAAAGAGAG GGATCGGCGC
CCAACGCCGG CGGAACTCAC CGCGCTGTAC AAGGCAGCCG GCCAGATGAA TGCCCAGCTA
CCGGTGTTCA TCGAATTGGC CGTGGAGACG GCGATGCGCC GGTCTGAGCT GCTGATGCTG
CGCCGCGACC ACGTACGCGG CAAGGTGGCT TATCTGGAAG ACACCAAGAA CGGCGAGCGT
CGCGCTGTGC CGTTGTCGTC GAGGGCGATT GCCCTGCTGG AGGGCTTGCC CACGCCCATC
GGTGGCGGCC GGTACTTCAA CCTGGCGCTC AACACGATCA GCAACTACTT TCCCCGGGCC
TGCGCTGCGG CCGGAATTGA AGGTTTGCGC CTTCACGACC TGCGCCATGA GGCGACCAGT
CGTTTCTTCG AGCGCGGCTT CACGATGATG GAGGTCGCGA GTATCACGGG CCACAAAACC
CTGGCGATGC TCAAGCGCTA CACGCACCTA TCTCCGCATG ACTTGGCTGA AAAATTAGGG
TAG
 
Protein sequence
MGERVFPPSV RYHSAMAYYE KRGDAWRAQI RRKGYPTLSA TFDTKAEAQR WAAEIEGDMS 
RARFVDMREA ESTTLDEALD RYLSEVTSTK KGAKQEQVRI KKWKEHKLAS KGLAAIRSSD
MAAYRDAELK EGKSTATVRL NLAVISHLFT VATKEWGIEG LTNPCRAIRM PKGSKERDRR
PTPAELTALY KAAGQMNAQL PVFIELAVET AMRRSELLML RRDHVRGKVA YLEDTKNGER
RAVPLSSRAI ALLEGLPTPI GGGRYFNLAL NTISNYFPRA CAAAGIEGLR LHDLRHEATS
RFFERGFTMM EVASITGHKT LAMLKRYTHL SPHDLAEKLG