| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3971 |
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| Symbol | |
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| ID | 6112935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4392912 |
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| End bp | 4393934 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641623760 |
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| Product | integrase family protein |
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| Protein accession | YP_001750820 |
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| Protein GI | 170723132 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.164476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGAGC GTGTATTTCC CCCAAGCGTT CGCTATCATT CCGCCATGGC CTACTACGAG
AAGCGCGGGG ACGCCTGGCG CGCCCAGATC CGCCGCAAAG GATATCCAAC CCTTTCCGCC
ACCTTTGACA CCAAGGCAGA AGCCCAGCGA TGGGCCGCCG AGATCGAGGG TGACATGTCG
CGTGCACGCT TCGTGGACAT GCGCGAGGCT GAGAGCACCA CGCTGGACGA GGCCCTGGAC
CGATACCTGT CTGAGGTGAC TTCTACCAAG AAGGGCGCCA AGCAGGAGCA AGTCCGCATC
AAGAAGTGGA AAGAACACAA GCTGGCCAGC AAAGGGCTGG CGGCCATCCG CTCGAGCGAC
ATGGCTGCCT ATCGCGATGC TGAGCTGAAG GAAGGGAAGT CGACGGCGAC AGTGCGCCTC
AACTTGGCAG TGATCAGCCA TCTCTTCACG GTGGCTACCA AGGAATGGGG TATCGAAGGA
TTGACCAACC CTTGCCGGGC GATCCGGATG CCGAAGGGCA GCAAAGAGAG GGATCGGCGC
CCAACGCCGG CGGAACTCAC CGCGCTGTAC AAGGCAGCCG GCCAGATGAA TGCCCAGCTA
CCGGTGTTCA TCGAATTGGC CGTGGAGACG GCGATGCGCC GGTCTGAGCT GCTGATGCTG
CGCCGCGACC ACGTACGCGG CAAGGTGGCT TATCTGGAAG ACACCAAGAA CGGCGAGCGT
CGCGCTGTGC CGTTGTCGTC GAGGGCGATT GCCCTGCTGG AGGGCTTGCC CACGCCCATC
GGTGGCGGCC GGTACTTCAA CCTGGCGCTC AACACGATCA GCAACTACTT TCCCCGGGCC
TGCGCTGCGG CCGGAATTGA AGGTTTGCGC CTTCACGACC TGCGCCATGA GGCGACCAGT
CGTTTCTTCG AGCGCGGCTT CACGATGATG GAGGTCGCGA GTATCACGGG CCACAAAACC
CTGGCGATGC TCAAGCGCTA CACGCACCTA TCTCCGCATG ACTTGGCTGA AAAATTAGGG
TAG
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| Protein sequence | MGERVFPPSV RYHSAMAYYE KRGDAWRAQI RRKGYPTLSA TFDTKAEAQR WAAEIEGDMS
RARFVDMREA ESTTLDEALD RYLSEVTSTK KGAKQEQVRI KKWKEHKLAS KGLAAIRSSD
MAAYRDAELK EGKSTATVRL NLAVISHLFT VATKEWGIEG LTNPCRAIRM PKGSKERDRR
PTPAELTALY KAAGQMNAQL PVFIELAVET AMRRSELLML RRDHVRGKVA YLEDTKNGER
RAVPLSSRAI ALLEGLPTPI GGGRYFNLAL NTISNYFPRA CAAAGIEGLR LHDLRHEATS
RFFERGFTMM EVASITGHKT LAMLKRYTHL SPHDLAEKLG
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