Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3960 |
Symbol | |
ID | 6112924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4385431 |
End bp | 4386195 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641623749 |
Product | hypothetical protein |
Protein accession | YP_001750809 |
Protein GI | 170723121 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.754064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGG TCACCATCCA CGACACTCAG CTGCCCGTCG TCGAGTACCG GGGCCAGCGC GTCGTCACCC TGGCGATGAT CGATCAGGTG CATGAGCGGC CCGAAGGAAC TGCTGGCCGC ACCTTCACCG CCCACAAGGA CCGTCTCATC GAGGGGGCGG ATTACTTCTT CGCCGACACC AGCCAAAAAG ACGTTTTGCG TTGTTTTGGA ATTGAGGTGC CCAACCGCGG ACTGATCCTG ATGGCCGAGC AAGGCTATCT GATGTTGGTC AAGCCTTTCA CCGACGATCT GTCGTGGTCG GTCCAGCGCC AGCTGGTCAA CAACTACTTC AGGCCGGCTC CCGCGCTGCC CACCGACTAC ATCACAGCGC TGGAGCACCT GCTGGCCTCG AAGCGTTCTG AGCAGCTGGC GCTCGAGCAG CGAGATCATG CAATTGCCAC CAAGGCGGAG ATCGGTAGCC GGCGCGAAGC CACAGCCATG GCCACCGCAT CAGCTGCAGT CCGCAAGGCA ATGCACCTGG AGAACGAACT GGGTCGTGGT TGCCAGCACG CCACCGTGAC GGCGGTTGAA AAGGCGGTCC ACCGGAGTTT CGGTGGCCAG GGTTTCCGCC CGCTCAAGAA TTGGTGCGAC AGCCACGGTG TGGCCGCCCC GAAAGTCCAA GACCCTCGAT TCGGCTGGGT TCGCTCCTGG CCAGCTGCCG CCTGGGCGGC TGTTTACCAA ATTGACCTGG CCGATCTGTT CGGCGCTGCT GGAGAGCACG AATGA
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Protein sequence | MNLVTIHDTQ LPVVEYRGQR VVTLAMIDQV HERPEGTAGR TFTAHKDRLI EGADYFFADT SQKDVLRCFG IEVPNRGLIL MAEQGYLMLV KPFTDDLSWS VQRQLVNNYF RPAPALPTDY ITALEHLLAS KRSEQLALEQ RDHAIATKAE IGSRREATAM ATASAAVRKA MHLENELGRG CQHATVTAVE KAVHRSFGGQ GFRPLKNWCD SHGVAAPKVQ DPRFGWVRSW PAAAWAAVYQ IDLADLFGAA GEHE
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