Gene PputW619_3956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3956 
Symbol 
ID6112920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4382996 
End bp4383778 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content61% 
IMG OID641623745 
ProductIstB ATP binding domain-containing protein 
Protein accessionYP_001750805 
Protein GI170723117 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACT TCATCCTGAA GACCCAGCGC ACCATCTGCG CGGAGCACGG CGGCTACGAC 
GCCAAGCTGG TGGAGCAGTT CACCGGCCCG GCGATCTGGA CTGGGTGCCC GCGTTGCGAG
TTTGATGCCC GCCACTCTGC CGACCAGGAA GTGCGCCAGC AGGCTGTAGA TTTGCTGGAT
AGCCGGACGA CCAACGCGCT GCTGATGGCC AGCAACGTGC AGCCGCGGTT CCGTGGGTTG
GGCTTCGACA GCTACCGCAC TGATTTCGCT CCAGGCGAGC AGCCTGGCGT ACTGGCGCGA
TGCCGCAACT ATGCCGAGAA TTTTGATCAG AACTGGGAAG CCGGTCGCTC GCTGATCCTG
CTTGGCACCA TGGGTACCGG GAAAACGCAC TTGGCCTCTG CGATCATCCA GGCGGTGATC
CAGGCTGATG CCCTTGGCGG TGCCAATGCG CTGTACACCA CCGCGTCTGA CATCATCCGC
AGCGTCAAAG AGACGTTCGG TAAGTCGGGC CGGAGCGAAG CTGAGGTTTA CGCTGATCTG
TGCAGCTACG ACCTGCTGGT GGTGGATGAG GTTGGTGCCC AGCACGGTAC CGATTTCGAG
CGTCAGGTGA TCTTCGAAGT CATCAACGGC CGCTATGGTC GCAAGCTGCC CACCATCATG
ATCTCGAACC TAAGTCTCCC CGAGGTACGC AAGTTCATCG GAGATCGGGT GGTTGATCGG
CTGTGCGACA ACGGCGGTGA AGTGCTGGTG CTGCGCTGGA AGTCCGTGCG GGGTGCCGCA
TGA
 
Protein sequence
MNDFILKTQR TICAEHGGYD AKLVEQFTGP AIWTGCPRCE FDARHSADQE VRQQAVDLLD 
SRTTNALLMA SNVQPRFRGL GFDSYRTDFA PGEQPGVLAR CRNYAENFDQ NWEAGRSLIL
LGTMGTGKTH LASAIIQAVI QADALGGANA LYTTASDIIR SVKETFGKSG RSEAEVYADL
CSYDLLVVDE VGAQHGTDFE RQVIFEVING RYGRKLPTIM ISNLSLPEVR KFIGDRVVDR
LCDNGGEVLV LRWKSVRGAA