| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3948 |
|---|
| Symbol | |
|---|
| ID | 6112912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4378121 |
|---|
| End bp | 4378459 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641623737 |
|---|
| Product | HNH endonuclease |
|---|
| Protein accession | YP_001750797 |
|---|
| Protein GI | 170723109 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1403] Restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGGC TCAAGACGCT CGGCTCACGC ATCAAGGAGA GCGCAGGGTC GCGGGTCAAG
GTGGTCACTC CTGGCAGCTG GCGGAGCGGT ATGACCAGCT CCCAACGTGG CTACGACTAC
CGGTGGCAGA AGGCGAGAGA GCAGTACCTA CGTGATAACC CACTGTGCGC ATACTGCGCC
CGGCAAGGGC GAACGGCAGC GGCCAGCGTC GTCGACCACA TCGTGGCGCA CCGAGGCGAC
AAGGATCTCT TCTGGAATCA GGCCAACTGG CAGTCGCTCT GCAAGCCCTG CCACGACTCG
GTCAAGCAGG CCGAGGAGGC TTCAGGCCTG ATGGGCTGA
|
|---|
| Protein sequence | MARLKTLGSR IKESAGSRVK VVTPGSWRSG MTSSQRGYDY RWQKAREQYL RDNPLCAYCA
RQGRTAAASV VDHIVAHRGD KDLFWNQANW QSLCKPCHDS VKQAEEASGL MG
|
|---|
| |