Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3909 |
Symbol | |
ID | 6112873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4342378 |
End bp | 4343265 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641623698 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001750758 |
Protein GI | 170723070 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCA AGCAGCTCAA GTTCCTCATC GCCCTCGACC AGACCCGCCA CTTCGGCCAG GCCGCGGCGC TGTGCCATAT CACCCAGCCG ACCTTGTCCA TGCGCCTGCG CAACCTGGAA GACGAACTGG ACCTGGTGCT GGTCAAGCGC GGCCAGCGCT TCGAGGGCTT CACCGAAGCC GGCGAGCGCA TCCTGGCCTG GGCCCGCACC CTGCTGGCCG CCCATGATGG CCTGCAGGCC GAGGCGGCCA GCTGCCGCGG CCAAGTGGTT GGTAGCCTGC GCTTGGGCAC AGTACCGCTG GCCAGTTTCA ACCCCATGCA GCTGCTGCTG CCGCTGCGCG AAAAATACCC CGAGCTGCAG TTTCAGCTCA GCTCGCACAG CACCGAGCAG ATCATGGATG GCCTGAGCCG CAACCAGCTC GACCTGGGGA TCTGCTATCT GGACCAGGTC AACGCCAACT TCTTCGAGGT GATCGAACTG GGCACCACCA CCATGGGCCT GCTGCACGAT ACCCGGCACT TCCAGTTCGA AGCCGACACC CTGCGTTGGG AGGAACTGGG TGAAATCCCT CTGGGCTTGC TGAGCAAGGG GATGCACTAC CGTCAGTCGC TCGACCTGAG CTTTCGCAGC CGCAGCCTGG AACCCAATGC CGTGCTGGAA AGCGACTCAA GCTTCCAGTT GGTTCAAGCC ATCAACACCG GCGTGTGCTG CGCAATCATG CCGCTCGATT GCGGGTTGGA AGACCTGAGC GAGCACATGC GCATCATCCC GATCACCGAC GCCAGCATCC ACAGCCCCGT CGGCCTGCTG CTGCGCCGCA GCGAGCCGCG CTCGGCGATT GCCGAACAGT GTTTTGACGA GGCGAAGTTG CTGTTCAGCG CAGGCTGA
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Protein sequence | MDIKQLKFLI ALDQTRHFGQ AAALCHITQP TLSMRLRNLE DELDLVLVKR GQRFEGFTEA GERILAWART LLAAHDGLQA EAASCRGQVV GSLRLGTVPL ASFNPMQLLL PLREKYPELQ FQLSSHSTEQ IMDGLSRNQL DLGICYLDQV NANFFEVIEL GTTTMGLLHD TRHFQFEADT LRWEELGEIP LGLLSKGMHY RQSLDLSFRS RSLEPNAVLE SDSSFQLVQA INTGVCCAIM PLDCGLEDLS EHMRIIPITD ASIHSPVGLL LRRSEPRSAI AEQCFDEAKL LFSAG
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