Gene PputW619_3909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3909 
Symbol 
ID6112873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4342378 
End bp4343265 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content64% 
IMG OID641623698 
ProductLysR family transcriptional regulator 
Protein accessionYP_001750758 
Protein GI170723070 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCA AGCAGCTCAA GTTCCTCATC GCCCTCGACC AGACCCGCCA CTTCGGCCAG 
GCCGCGGCGC TGTGCCATAT CACCCAGCCG ACCTTGTCCA TGCGCCTGCG CAACCTGGAA
GACGAACTGG ACCTGGTGCT GGTCAAGCGC GGCCAGCGCT TCGAGGGCTT CACCGAAGCC
GGCGAGCGCA TCCTGGCCTG GGCCCGCACC CTGCTGGCCG CCCATGATGG CCTGCAGGCC
GAGGCGGCCA GCTGCCGCGG CCAAGTGGTT GGTAGCCTGC GCTTGGGCAC AGTACCGCTG
GCCAGTTTCA ACCCCATGCA GCTGCTGCTG CCGCTGCGCG AAAAATACCC CGAGCTGCAG
TTTCAGCTCA GCTCGCACAG CACCGAGCAG ATCATGGATG GCCTGAGCCG CAACCAGCTC
GACCTGGGGA TCTGCTATCT GGACCAGGTC AACGCCAACT TCTTCGAGGT GATCGAACTG
GGCACCACCA CCATGGGCCT GCTGCACGAT ACCCGGCACT TCCAGTTCGA AGCCGACACC
CTGCGTTGGG AGGAACTGGG TGAAATCCCT CTGGGCTTGC TGAGCAAGGG GATGCACTAC
CGTCAGTCGC TCGACCTGAG CTTTCGCAGC CGCAGCCTGG AACCCAATGC CGTGCTGGAA
AGCGACTCAA GCTTCCAGTT GGTTCAAGCC ATCAACACCG GCGTGTGCTG CGCAATCATG
CCGCTCGATT GCGGGTTGGA AGACCTGAGC GAGCACATGC GCATCATCCC GATCACCGAC
GCCAGCATCC ACAGCCCCGT CGGCCTGCTG CTGCGCCGCA GCGAGCCGCG CTCGGCGATT
GCCGAACAGT GTTTTGACGA GGCGAAGTTG CTGTTCAGCG CAGGCTGA
 
Protein sequence
MDIKQLKFLI ALDQTRHFGQ AAALCHITQP TLSMRLRNLE DELDLVLVKR GQRFEGFTEA 
GERILAWART LLAAHDGLQA EAASCRGQVV GSLRLGTVPL ASFNPMQLLL PLREKYPELQ
FQLSSHSTEQ IMDGLSRNQL DLGICYLDQV NANFFEVIEL GTTTMGLLHD TRHFQFEADT
LRWEELGEIP LGLLSKGMHY RQSLDLSFRS RSLEPNAVLE SDSSFQLVQA INTGVCCAIM
PLDCGLEDLS EHMRIIPITD ASIHSPVGLL LRRSEPRSAI AEQCFDEAKL LFSAG