| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3876 |
|---|
| Symbol | |
|---|
| ID | 6112840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4310392 |
|---|
| End bp | 4311087 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641623666 |
|---|
| Product | allophanate hydrolase subunit 1 |
|---|
| Protein accession | YP_001750726 |
|---|
| Protein GI | 170723038 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2049] Allophanate hydrolase subunit 1 |
|---|
| TIGRFAM ID | [TIGR00370] conserved hypothetical protein TIGR00370 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.348545 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGC GTATCGAAGT GGTTGCGATC GACAGCCTGA TGGTGCGCCT GTTCGACCGG
ATCGACGAGG CCAACATGCC GTGGCTGCTC GCCGCGAGCC ACCGTTTGAG TGCCGCCTTC
GGTGAGCACC TGGTGGACCT GGTGCCGTCC TACACCACGC TGATGGTGCA GTTCGATATG
CCGCCAGAGC AGGCGAGGGC GTTGATCGAC CAGGCGCTGG AGGGGCTGCA GCCAGACGCG
GGCACCAGCG GTCGCCGGCA CGAGATTGCT GTGTGGTACG ACGCCAGTGT CGGCCCTGAG
CTGCCGCTGC TGGCCGCACG CAGCGGCTTG AGCGAGCAAG AGGTGATCCG CCTGCACAGC
GAGCGCGAGT ACCCGGTGTT CGCCCTTGGC TTCGCTCCGG GGTTCGGTTT CATGGGGCTG
GTGGACGAAC GCCTGGCATC CCCGCGGCTG AGCACTCCGC GCAAGCGCGT GGCGCCCGGC
AGTGTCGGCA TTGCCGAGCG CCAGACAGCG GCCTATCCCG CCGTGTCACC TGGCGGCTGG
AACCTCATAG GGCGTACCCC GGTTCGCCTG TTCGACCGCG AGCGTGAAGG CTACAGCCTG
CTGCAGCCGG GCGATCGGGT GCGCTTCGTG GCGGTGTCCC ATGCCGAGTT CCTGGCATTG
GGTGGTGACG ACAGCCCGTT GGAGGCACAG GCATGA
|
|---|
| Protein sequence | MKLRIEVVAI DSLMVRLFDR IDEANMPWLL AASHRLSAAF GEHLVDLVPS YTTLMVQFDM
PPEQARALID QALEGLQPDA GTSGRRHEIA VWYDASVGPE LPLLAARSGL SEQEVIRLHS
EREYPVFALG FAPGFGFMGL VDERLASPRL STPRKRVAPG SVGIAERQTA AYPAVSPGGW
NLIGRTPVRL FDREREGYSL LQPGDRVRFV AVSHAEFLAL GGDDSPLEAQ A
|
|---|
| |