| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3860 |
|---|
| Symbol | |
|---|
| ID | 6112824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4293951 |
|---|
| End bp | 4294904 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641623650 |
|---|
| Product | ribonuclease BN |
|---|
| Protein accession | YP_001750710 |
|---|
| Protein GI | 170723022 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1295] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTTC CCGACCTGGG TGGCTTGCCC CTTCACCGCA TTCTGGTGCG CACCGTCAAG
GAATTCCTTG ACGACGAGAT GTCCACCTAC GCCTCTGCGC TTGCTTACCA GATGCTGTTT
TCGTTGTTCC CGTTCCTGCT GTTCCTGATC GCACTGATCG GTTTTCTGCA CCTGCCGGAT
TTCTTCTCGT GGCTGCGCAT GCAATCGGAA CTGGTATTGC CGCCCCAGGC GCTGGAACAG
GTCAACCCCG TCATCGATCA GTTGCAGCAG TCCAAAGGTG GCCTGCTGTC GGTGGGTATC
GTCATCGCGC TGTGGACTGC CTCTGCAGGC GTACGGCTGA TGATGAGTGC CATGAATGCC
GCCTATGACG TGCCCGAAGG GCGCCCGGTG TGGAAGCGCA TCCCGTTGTC GATTATCTAT
ACCGTCGGCA TTGCCGGTAT GTTGCTGGCG GCGGCAGCGT TGATGGTGCT GGGGCCTCAG
GTGATGGAGT GGATCGCCGC GCAGATCGGC ATGCAAGAAG TGATCGTCAC GGTGTGGACG
ATCTTGCGTT GGCCGGCGAT CATCATCCTG ATGATGGTGG CGGTGGCGGT GATCTACTAC
GTGATGCCCG ACGTGAAACA GAAGTTTCGC TTCATCACCC CAGGTTCAGT GCTGGCGGTG
GTGGTCTGGA TCATCGCTTC GCTGGCCTTC GCTTACTATG TGAAGACTTT CGCCGACTAC
AACGCCATGT ATGGCAGTAT CGGTGCGATC ATCGTGTTGT TGTTGTATTT CTACATTTCT
GCTGCCGTAT TGTTGCTGGG CGCGGAGATG AACGCTGTGA TCGAACATAT GTCCGCTGAG
GGCAAAGACC CTGGCGAAAA GGATTTCGAG GGCGATAAAC CCAAGGAAAC CCTGACCGTG
CTCGGCCATG AACATCCGGT CGAGCCCCAG CCTACCGAGC CGAACCCGCG ATGA
|
|---|
| Protein sequence | MIFPDLGGLP LHRILVRTVK EFLDDEMSTY ASALAYQMLF SLFPFLLFLI ALIGFLHLPD
FFSWLRMQSE LVLPPQALEQ VNPVIDQLQQ SKGGLLSVGI VIALWTASAG VRLMMSAMNA
AYDVPEGRPV WKRIPLSIIY TVGIAGMLLA AAALMVLGPQ VMEWIAAQIG MQEVIVTVWT
ILRWPAIIIL MMVAVAVIYY VMPDVKQKFR FITPGSVLAV VVWIIASLAF AYYVKTFADY
NAMYGSIGAI IVLLLYFYIS AAVLLLGAEM NAVIEHMSAE GKDPGEKDFE GDKPKETLTV
LGHEHPVEPQ PTEPNPR
|
|---|
| |