Gene PputW619_3856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3856 
Symbol 
ID6112820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4291052 
End bp4292413 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content65% 
IMG OID641623646 
Producttranscriptional regulator 
Protein accessionYP_001750706 
Protein GI170723018 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAGCA ATTTCGTGTG GATCCCGCAG CTCGTCGACG ATGATCAACC CCGGTATCTG 
GCACTGGTCG ACGCTATAGG CAACGCCATC GAGAGCGGCG TACTCAAGGT CGGTGACCGC
CTGCCGCCGC AACGGCGCCT GGCCTGGAAA CTGGGCCTGA ACCCCAGCAC CACCCAACAG
GCCTACCGTG AAGCCGCCGC TCGCCACCTG GTTGCGGGTG AGGTGGGCCG CGGTACCTAT
GTGCTGGCGG GGAGCAAGGA AGCGACCTTG TTTCGTCTGA AACACTGCGA AGGGCAAACG
CGGCTGATCG ACCTGTCGAC CAATGTACCG GTTGCCGATC CGCACAATCA TGATCTGCAC
GACAGCTTGC GCAGGCTGCT GGAAGGTCAG AACCACGGCT TGCTCGACCA TTACCTGGGC
CCCGAACAGT TGCTGCTGGG GCGCATCCGC GGCGCCCACT GGCTGGGCAA TCGCGGCCTG
GCCCTGTCGG CCGACCAGCT GTTGCTGTGC GGCGGAGCCC AGCAGGCGCT GGCACTGGTG
CTGCAGTCAT TCTGCCAGGC GGGTGAGCCC GTCATGCTTG AAGCCCTGAC CGCTCCGGGT
ATCAAGGCCG CCTGCCGGCA ACTGCGTCTG CCCGTGCATG GCGTCGCACT GGACAACCAA
GGCCTGCGGC CCGATGACCT GGACCGGGTA GCGCGCGCCA GCGGTGCCCG CGTGCTGGTG
ACCACACCCA CCCTGCACAA CCCCACGGGC GCCTGCATGG ATGATGCTCG CCGCGAGGCA
ATCGCTGGGG TAGTCAAACG CCTGGGGCTG TTGGTGATCG AGGATGATGT GTATGGCGCA
CTCAGCGACC GGCCGCCGCT CTACCCGCTA TTGGGCGATC AAGGGATCTA CATCAGCAGC
CTGTCCAAGA CCGTGGCTGC AGGCTTGAGG TTGGGGTGGA TCGTGGCCAG CCCGAAGTTG
CTGTCACAGG TCGACCCGCA TGCCCAGGCA AGCCACTGGC CGGTGTCGCC ATTGGGCTTG
CATGTCGCTT GCCAATGGAT CGATGACGGT ACCGCCGCCC GGCGGCTGGC TTGGCAGAAA
GCAGAACTTG CCGAGCGCTG GCGCCTGGCA CGCAGGCTGC TGGGTGATGG GCTACACAAC
GCAGGTCAGC CTTCACCCCA CGCGTGGCTG GGCACGCCGC AGGGGGCTGA GGCGGTGGTA
AAGCAGTGTC GTGAGCAAGG TGTGGAAGTC GTCCCGGCGA GTGTCTTCGC CATTGGCGCA
AGCGAGGTGC AAGCCGTACG CATCAGCCTG TCGGCGGCAG GCAGCCGGGC TGAACTGAAA
CGAGGGCTGG AGGTAGTACG GCAGGTCCTG TCCGGTCAAT GA
 
Protein sequence
MGSNFVWIPQ LVDDDQPRYL ALVDAIGNAI ESGVLKVGDR LPPQRRLAWK LGLNPSTTQQ 
AYREAAARHL VAGEVGRGTY VLAGSKEATL FRLKHCEGQT RLIDLSTNVP VADPHNHDLH
DSLRRLLEGQ NHGLLDHYLG PEQLLLGRIR GAHWLGNRGL ALSADQLLLC GGAQQALALV
LQSFCQAGEP VMLEALTAPG IKAACRQLRL PVHGVALDNQ GLRPDDLDRV ARASGARVLV
TTPTLHNPTG ACMDDARREA IAGVVKRLGL LVIEDDVYGA LSDRPPLYPL LGDQGIYISS
LSKTVAAGLR LGWIVASPKL LSQVDPHAQA SHWPVSPLGL HVACQWIDDG TAARRLAWQK
AELAERWRLA RRLLGDGLHN AGQPSPHAWL GTPQGAEAVV KQCREQGVEV VPASVFAIGA
SEVQAVRISL SAAGSRAELK RGLEVVRQVL SGQ