Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3856 |
Symbol | |
ID | 6112820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4291052 |
End bp | 4292413 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641623646 |
Product | transcriptional regulator |
Protein accession | YP_001750706 |
Protein GI | 170723018 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAGCA ATTTCGTGTG GATCCCGCAG CTCGTCGACG ATGATCAACC CCGGTATCTG GCACTGGTCG ACGCTATAGG CAACGCCATC GAGAGCGGCG TACTCAAGGT CGGTGACCGC CTGCCGCCGC AACGGCGCCT GGCCTGGAAA CTGGGCCTGA ACCCCAGCAC CACCCAACAG GCCTACCGTG AAGCCGCCGC TCGCCACCTG GTTGCGGGTG AGGTGGGCCG CGGTACCTAT GTGCTGGCGG GGAGCAAGGA AGCGACCTTG TTTCGTCTGA AACACTGCGA AGGGCAAACG CGGCTGATCG ACCTGTCGAC CAATGTACCG GTTGCCGATC CGCACAATCA TGATCTGCAC GACAGCTTGC GCAGGCTGCT GGAAGGTCAG AACCACGGCT TGCTCGACCA TTACCTGGGC CCCGAACAGT TGCTGCTGGG GCGCATCCGC GGCGCCCACT GGCTGGGCAA TCGCGGCCTG GCCCTGTCGG CCGACCAGCT GTTGCTGTGC GGCGGAGCCC AGCAGGCGCT GGCACTGGTG CTGCAGTCAT TCTGCCAGGC GGGTGAGCCC GTCATGCTTG AAGCCCTGAC CGCTCCGGGT ATCAAGGCCG CCTGCCGGCA ACTGCGTCTG CCCGTGCATG GCGTCGCACT GGACAACCAA GGCCTGCGGC CCGATGACCT GGACCGGGTA GCGCGCGCCA GCGGTGCCCG CGTGCTGGTG ACCACACCCA CCCTGCACAA CCCCACGGGC GCCTGCATGG ATGATGCTCG CCGCGAGGCA ATCGCTGGGG TAGTCAAACG CCTGGGGCTG TTGGTGATCG AGGATGATGT GTATGGCGCA CTCAGCGACC GGCCGCCGCT CTACCCGCTA TTGGGCGATC AAGGGATCTA CATCAGCAGC CTGTCCAAGA CCGTGGCTGC AGGCTTGAGG TTGGGGTGGA TCGTGGCCAG CCCGAAGTTG CTGTCACAGG TCGACCCGCA TGCCCAGGCA AGCCACTGGC CGGTGTCGCC ATTGGGCTTG CATGTCGCTT GCCAATGGAT CGATGACGGT ACCGCCGCCC GGCGGCTGGC TTGGCAGAAA GCAGAACTTG CCGAGCGCTG GCGCCTGGCA CGCAGGCTGC TGGGTGATGG GCTACACAAC GCAGGTCAGC CTTCACCCCA CGCGTGGCTG GGCACGCCGC AGGGGGCTGA GGCGGTGGTA AAGCAGTGTC GTGAGCAAGG TGTGGAAGTC GTCCCGGCGA GTGTCTTCGC CATTGGCGCA AGCGAGGTGC AAGCCGTACG CATCAGCCTG TCGGCGGCAG GCAGCCGGGC TGAACTGAAA CGAGGGCTGG AGGTAGTACG GCAGGTCCTG TCCGGTCAAT GA
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Protein sequence | MGSNFVWIPQ LVDDDQPRYL ALVDAIGNAI ESGVLKVGDR LPPQRRLAWK LGLNPSTTQQ AYREAAARHL VAGEVGRGTY VLAGSKEATL FRLKHCEGQT RLIDLSTNVP VADPHNHDLH DSLRRLLEGQ NHGLLDHYLG PEQLLLGRIR GAHWLGNRGL ALSADQLLLC GGAQQALALV LQSFCQAGEP VMLEALTAPG IKAACRQLRL PVHGVALDNQ GLRPDDLDRV ARASGARVLV TTPTLHNPTG ACMDDARREA IAGVVKRLGL LVIEDDVYGA LSDRPPLYPL LGDQGIYISS LSKTVAAGLR LGWIVASPKL LSQVDPHAQA SHWPVSPLGL HVACQWIDDG TAARRLAWQK AELAERWRLA RRLLGDGLHN AGQPSPHAWL GTPQGAEAVV KQCREQGVEV VPASVFAIGA SEVQAVRISL SAAGSRAELK RGLEVVRQVL SGQ
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