Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3845 |
Symbol | |
ID | 6112809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4282585 |
End bp | 4284273 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641623635 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_001750695 |
Protein GI | 170723007 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCCG ACTTCTGGAA TGACAAGCGC CCGGCGGGCG TGCCTTCCAC CATCGATATC CATGCGTACA CCTCGGTCGT CGAGGTTTTC GAGCGCTCCT GCAAGCGCTT CGCCGACCGC CCGGCGTTCA GCAACCTGGG CAAGACCCTG ACCTATGGCG AACTCGACCG CCTTTCGGCG GCCTTTGCTG CCTGGCTGCA GCAGCATACC AACCTGGTGC CGGGTGACCG CATCGCCGTA CAGATGCCCA ACGTGCTGCA GTATCCCATT GCGGTGTTCG GCGCCCTGCG CGCCGGGCTG ATCGTGGTCA ACACCAACCC GCTTTACACC GAGCGTGAAA TGCGCCACCA GTTCAAAGAT GCCGGTGCCC GCGCCCTGGT GTACCTGAAC ATGTTCGGCA AGCGGGTCCA GGAGGTGCTG CCCGATACCG GCATCGAATA CCTGATCGAG GCGAAGATGG GCGACCTGTT GCCCATGGCC AAGGGCTGGT TGATCAACAC CGTGGTCGAC AAGGTAAAGA AAATGGTCCC GGCCTATCAT CTGCCGCAGG CCATCTCGTT CAAGCAGGCA CTGCGCGAGG GCGCGGCGCT GAGCCACAAG CCGGTAACGC TGAGCCTCGA CGACATCGCC GTGCTGCAGT ACACCGGCGG CACCACGGGC CTGGCCAAGG GCGCCATGCT CACCCACGGC AACCTGGTGG CCAACATGCT GCAGGTGCTG GCGTGCTTTT CGCAGCATGG CCCGGACGGG CAGAAGCTGA TCAAGGAAGG CCAGGAGGTG ATGATCGCGC CGCTGCCGCT CTACCACATC TATGCCTTTA CCGCGAACTG CATGTGCATG ATGGTCACCG GCAACCATAA TGTGTTGATC ACCAACCCGC GCGATATCCC TGGCTTCATC AAGGAACTGG GCAAATGGCG GTTCACCGCA CTGTTGGGGT TGAACACCCT GTTCGTGGCG CTGATGGATC ACCCGGGCTT CAGGCAGCTG GATTTCTCGG CGCTCAAGGT GACCAACTCT GGCGGTACGG CACTGGTCAA GGCCACCGCC GAACGTTGGG AGAGCCTGAC CGGCTGCCGC ATTGTCGAGG GCTACGGCCT GACAGAGACT TCGCCAGTGG CCAGCACCAA CCCTTATGGC GAGCTGGCAC GCCTGGGTAC CGTGGGCATA CCGGTTGCAG ACACCGCGTT CAAGGTGATC GATGATGAGG GCAATGAACT GCCGCTCGGT GAGCGGGGCG AGTTGTGCAT AAAGGGCCCG CAGGTGATGA AGGGGTACTG GCAGCAACCC GAGGCTACGG CGCAGACCCT GGATGCCGAT GGCTGGCTGA AAACCGGCGA CATTGCAGTG ATCGACCCGG ACGGCTTCAC GCGTATCGTC GACCGCAAGA AGGACATGAT CATCGTCTCG GGCTTCAACG TGTACCCCAA CGAAATCGAA GACGTGATCA TGGGTCACCC GAAGGTGGCC AACTGCGCCG CCATCGGCGT GCCGGACGAG CGTTCGGGCG AGGCCGTCAA ACTGTTCGTG GTGGCCCGTG AGGGCGGGCT CAGCGTCGAT GAACTCAAGG CCTACTGCAA GGCCAACCTC ACAGGTTACA AAGTGCCCAA GCACATCGTG CTGCGCGAGT CGTTGCCGAT GACACCGGTG GGCAAGATCC TGCGTCGCGA ACTGCGCGAC ATCGCGTAA
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Protein sequence | MQADFWNDKR PAGVPSTIDI HAYTSVVEVF ERSCKRFADR PAFSNLGKTL TYGELDRLSA AFAAWLQQHT NLVPGDRIAV QMPNVLQYPI AVFGALRAGL IVVNTNPLYT EREMRHQFKD AGARALVYLN MFGKRVQEVL PDTGIEYLIE AKMGDLLPMA KGWLINTVVD KVKKMVPAYH LPQAISFKQA LREGAALSHK PVTLSLDDIA VLQYTGGTTG LAKGAMLTHG NLVANMLQVL ACFSQHGPDG QKLIKEGQEV MIAPLPLYHI YAFTANCMCM MVTGNHNVLI TNPRDIPGFI KELGKWRFTA LLGLNTLFVA LMDHPGFRQL DFSALKVTNS GGTALVKATA ERWESLTGCR IVEGYGLTET SPVASTNPYG ELARLGTVGI PVADTAFKVI DDEGNELPLG ERGELCIKGP QVMKGYWQQP EATAQTLDAD GWLKTGDIAV IDPDGFTRIV DRKKDMIIVS GFNVYPNEIE DVIMGHPKVA NCAAIGVPDE RSGEAVKLFV VAREGGLSVD ELKAYCKANL TGYKVPKHIV LRESLPMTPV GKILRRELRD IA
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