| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3833 |
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| Symbol | |
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| ID | 6112797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4265204 |
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| End bp | 4266127 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641623623 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001750683 |
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| Protein GI | 170722995 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.450115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGC CGCGCGTAAC CCTGGATCAG TGGCGAACCT TGCAGGCAGT GGTCGATCAC
GGCGGGTTTG CCCAGGCAGC CGAAGCTCTG CACCGCTCGC AGTCATCGGT CAGTTACACG
GTGGCGCGCA TGCAAGAGCA GCTCGGCGTG CCACTGCTAC GCATCGATGG CCGCAAAGCC
GTGCTGACCG AGGCGGGCAA CGTGCTGCTG CGCCGCTCCC GGCACCTGGT CAAGCAGGCC
AGCCAGCTTG AAGACCTGGC TCACCACATG GAGCAAGGCT GGGAAGCCGA GGTACGTGTC
GTGGTCGATG CCGCCTACCC CAGTGCGCGC CTGGTACGTG CCCTGGCCGC GTTCATGCCG
CAGAGCCGCG GTTGCCGGGT GCGCCTGCGC GAGGAAGTGC TGTCCGGCGT CGAGGAGGTG
ATGCATGAAG GTATCGCCGA CCTTGCCATC AGCAGCTACA GCATTGGCGG CTATCTGGGC
ACCGAACTCA GTGCCGTGGA GTTCGTGGCC GTCGCCCACC CCGAGCACAG CCTGCACCGC
CTGGGCCGGG AGATCACTTT CCAGGACCTG GAAAGCCAGT TGCAAGTGGT AATCCGCGAC
TCCGGCCGCG CCCAACCCCG CGATGTCGGC TGGCTCGGCG CTGAACAGCG CTGGACAGTC
GGCAGCCTGG GGACCGCCAC TACCTTCGTC AGCAGCGGGC TGGGCTTTGC TTGGCTGCCG
CGGCACATGA TCGATCGTGA ACTGCGCGAA GGCGTGCTCA AGCCGCTGCC ACTGGACCAG
GGTGGCAGCC GTCATCCACT GTTCTACCTT TATTCGAGCA AAGAGAAGAC CTTGGGCCCG
GCCACGCAGA TTCTCATCGA CCTGCTGCGC AATTTCGACA CCGCGCCACT GGACGTGCCC
TTCGCAGCCC CCCCGCAAGC CTGA
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| Protein sequence | MKAPRVTLDQ WRTLQAVVDH GGFAQAAEAL HRSQSSVSYT VARMQEQLGV PLLRIDGRKA
VLTEAGNVLL RRSRHLVKQA SQLEDLAHHM EQGWEAEVRV VVDAAYPSAR LVRALAAFMP
QSRGCRVRLR EEVLSGVEEV MHEGIADLAI SSYSIGGYLG TELSAVEFVA VAHPEHSLHR
LGREITFQDL ESQLQVVIRD SGRAQPRDVG WLGAEQRWTV GSLGTATTFV SSGLGFAWLP
RHMIDRELRE GVLKPLPLDQ GGSRHPLFYL YSSKEKTLGP ATQILIDLLR NFDTAPLDVP
FAAPPQA
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