Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3824 |
Symbol | |
ID | 6112788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4256612 |
End bp | 4257415 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641623615 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001750675 |
Protein GI | 170722987 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00247699 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.327982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGCG ACCACGCCAA CCGCCTGGCC ACGGTGATTC GCAGCATCGG CAGCGACGCA CTGGGCCCGG CCATCGACAC TGCGCTCAAG GGCGTGGTCG ATTACGACAT GAGCTGCGCT TACCTGTTTC GCTTCAACCA GCCGGCGCTG TTGGTGCACG ATGGCTACAA CCAGCGGGTG ACCGAGCGTA CGCTCAAGGC GTATCTGCGC GGGGGCTATT TGCTCGACCC GTTCTACGTC GCTTGCACCA ACAATCACCC CACGGGGCTG TGGCGCATGA GCGAGCTGGC GCCGGACAGC TTCTTCGCCT CGGGCTTTTC CATCTCGCCC GACATCCACC CCTGTGTCTC GTCGCACCAC GGCAGCTTGA TCGAAGAAAT CGGCTTCATC GTCCCTGTGC GCCCACGCAC GGCGCTGGTG TTTTCCTTGA TGCGCGGCTT GCACAAGGGG GCGTTCGAAA CCGATGAAAC CCAACGCCTC GCTGCGCTGA CGCCGCTGAT CGATGCCATT TTCAGCCAGC ACCTGCACCT TGCTCATGCC GAAGACTTGG CCGACCCGCA GGACTCGGAC AGCCAGTTGG AAGACGCCTT CGTCGATATC CTCCAGGGCC AGTTGACCGA AACCCAGCGG CATGTGGCCA AGCTGATTTT GCAGGGGCAC AGCAGCCAGT CGATCTCGCG GGCGCTGGGG ATTTCGGCAG GGACGGTCAA GGTGCACCGG CACAACATCT GGCAGCGGTT GGGGATTGCC GGGAATGCGG AGTTGTTTCG GTTGTTTATT GGCTATCTCA CCAAGCAGCA ATGA
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Protein sequence | MNSDHANRLA TVIRSIGSDA LGPAIDTALK GVVDYDMSCA YLFRFNQPAL LVHDGYNQRV TERTLKAYLR GGYLLDPFYV ACTNNHPTGL WRMSELAPDS FFASGFSISP DIHPCVSSHH GSLIEEIGFI VPVRPRTALV FSLMRGLHKG AFETDETQRL AALTPLIDAI FSQHLHLAHA EDLADPQDSD SQLEDAFVDI LQGQLTETQR HVAKLILQGH SSQSISRALG ISAGTVKVHR HNIWQRLGIA GNAELFRLFI GYLTKQQ
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