| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3810 |
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| Symbol | |
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| ID | 6112774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4242076 |
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| End bp | 4244211 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641623601 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_001750661 |
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| Protein GI | 170722973 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00509223 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAAGCG CACAACCGCG CCCCGATGTC GATGACCCCC TGCTCGATGG CCTGCTGATT
CTGTGCCGCC TGCACGGTCG GCCGGCCAGC CGCGCCAGCC TGAGCAGTGG GCTGCCACTG
TTTCAACAAC GCCTGGGGGC GGATTTGCTG CCACGCGCTG CCGCGCGTGC CGGCTTGCAA
GGGCGTGTGC TGCAGCGTGA GCTGGCGACC ATTTCGCCGC TCAACCTGCC GGTGCTGCTG
TTGCTCAAAG ACGGCCGCAG CGCGGTGCTG CAGCGCTGGA GCGAAGATGG CCAGGCGCTG
ATCCTGCCCT GCGAGGCTGA GGGCGGCGAA CAATGGGTAG CGCGCGAGGC GCTGGAACAG
GCCTACGCAG GTCACGCCCT GTTCGCACGA CCCCGTCATA CCCTGGAGGA AGTCCGCTCG
CCGCTGCTGC CGCGGGTCGA GGCCTGGTTC CGCGATACCT TGCGCCATTC CCGCTGGCTG
TACGGCGATG CTTTGCTGGC CAGCCTGCTG ATCAACCTGC TGGGCCTGAT GGTGCCGCTG
TTCGTGATGC AGACCTATGA TCGCGTGGTA CCCAACCAGG CACTTTCAAC CTTGTGGGTA
CTGGTCGCCG GCCTGTTCAT AGGCACCGCC TTCGAGCTGG TGCTGCGCAT GGTCCGCGCC
CACCTGCTGG ACCAGGCAGG CAAGAAGACC GACCTGATCC TCTCCGCCGC TCTGTTCGAA
CGCATCACCG GCATGGCCAT GAAAGCCAAA CCTGCCAGCA TCGGCGGCTT CGCCCAGAGC
ATCCACGACT TCCAGGGCCT GCGCGAATTC CTTACCGCAG TTACCCTGAC CAGCATCATC
GACCTGCCCT TCGTCGCCCT CATGCTACTG GTGATCGGCC TGCTGGGCGG CTGGCTGGTA
CTGATCCCGC TGATCGCCTT CCCGCTGGCG GTGGGCTTTG CCCTGTTCAT CCAGGCACGC
CTGCGCGACA CCGTGCAAAA AAGCCTCAGC CTCGGTGCGG TACGCCAGGC ATTGCTGATC
GAAACCCTCG GTGGCCTGGA AACCCTCAAG GCCTGCGGTG CCGAGAGCGA GCGCCAGTAC
CAGTGGGAAC ACACCAATGG CGCCATGGCC CGCCTCGACG CCCACGCCCG CAACCTGTCG
TCGCTGGCCA GCAACGGCAC GCTGTTCATC CAGCAATTCT GCGGCATGGC CACCATCGTC
GCCGGGGTAT ACAGCATCAT CGCTGGCAAC CTCAGTGTCG GCGCTCTGGT AGCCAGTTAC
ATGCTCGGTA GCCGGGTTTT GGCACCGCTC GGCCAGATTG CAGGGCTGAT CACCCGCTAT
CAGCAAGCGC AACTGACGAT GCGCAGCACC GATGCCCTGA TGGCCCTGCC GCAAGAACGC
CAGGCCGAAC AGCAAGCCCT GGAGCACACT ACCCTCAAGG GCGGCCTGAC CCTCAGCCAT
GTCAGCTTCC GCTACCCGGA ACAGACCAGC CCGGCACTGC AGGATGTGAA CGTGGCCATA
AAGCCGGGTG AGCGGATTGG CATCATCGGC CGCAGCGGCT CGGGCAAAAG CACCCTGGGC
CGCCTGCTGA TGGGCTTTCA TCACCCGGAA GAAGGCCAGG TATTGCTGGA CAACCTCGAC
CTGCGCCAAC TGGACATCGC CGACCTGCGC AGCCAGCTTG GCTACGTCGC CCATGACCTG
CCGCTGCTGG CCGGCAGCCT GCGTGACAAC CTGACCCTCG GTGCCCGCCA CGTAAGCGAT
GCACGCATGC TCGAAGTGGC CGAACTGACC GGCGTCAGCG AGCTGGCCCG CCAGCACCCG
CAGGGTTTCG ACCGCCCGGT GGGCGAACGC GGCCAATTGC TTTCCGGCGG GCAGCGCCAG
GCCGTGCTGC TGGCCCGCGC GCTGTTGCTG GAGCCGCCCA TCCTGATCCT CGACGAACCT
ACCAGCCACA TGGACAACAG CAGCGAAGAG CAACTGCGCC AGCGACTGCT GAACTGGGTG
CCCGGCAAGA CCCTGCTGCT GGTCACCCAC CGCACCTCGA TGCTGAGCCT GGTGGACCGG
CTGCTGGTGC TGGACAACGG CAAGATCGTC GCCGACGGGC CAAAGGATGC GGTTATCGAT
GCCCTGCGCA AGGGCCGTAT TGGCGCAGCT CTCTAG
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| Protein sequence | MQSAQPRPDV DDPLLDGLLI LCRLHGRPAS RASLSSGLPL FQQRLGADLL PRAAARAGLQ
GRVLQRELAT ISPLNLPVLL LLKDGRSAVL QRWSEDGQAL ILPCEAEGGE QWVAREALEQ
AYAGHALFAR PRHTLEEVRS PLLPRVEAWF RDTLRHSRWL YGDALLASLL INLLGLMVPL
FVMQTYDRVV PNQALSTLWV LVAGLFIGTA FELVLRMVRA HLLDQAGKKT DLILSAALFE
RITGMAMKAK PASIGGFAQS IHDFQGLREF LTAVTLTSII DLPFVALMLL VIGLLGGWLV
LIPLIAFPLA VGFALFIQAR LRDTVQKSLS LGAVRQALLI ETLGGLETLK ACGAESERQY
QWEHTNGAMA RLDAHARNLS SLASNGTLFI QQFCGMATIV AGVYSIIAGN LSVGALVASY
MLGSRVLAPL GQIAGLITRY QQAQLTMRST DALMALPQER QAEQQALEHT TLKGGLTLSH
VSFRYPEQTS PALQDVNVAI KPGERIGIIG RSGSGKSTLG RLLMGFHHPE EGQVLLDNLD
LRQLDIADLR SQLGYVAHDL PLLAGSLRDN LTLGARHVSD ARMLEVAELT GVSELARQHP
QGFDRPVGER GQLLSGGQRQ AVLLARALLL EPPILILDEP TSHMDNSSEE QLRQRLLNWV
PGKTLLLVTH RTSMLSLVDR LLVLDNGKIV ADGPKDAVID ALRKGRIGAA L
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