| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3808 |
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| Symbol | |
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| ID | 6112772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4232583 |
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| End bp | 4240157 |
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| Gene Length | 7575 bp |
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| Protein Length | 2524 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641623599 |
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| Product | outer membrane adhesin like proteiin |
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| Protein accession | YP_001750659 |
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| Protein GI | 170722971 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01965] VCBS repeat
[TIGR03661] type 1 secretion C-terminal target domain (VC_A0849 subclass) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000355585 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTAAGT TAGTCGGTGT GGTCAGTAAG GTGATGGGGC AAGTATTCGC CGTTGGCAGC
GATGGCAGCC GGCGTCCTCT GATCGAGGGC GACCGCCTAT ATGCGGGCGA GCAGTTGCAA
ACGGGGCTCG CAGGCGCCGT GGCTGTACGC TTGGATAATG GCGCCGAGCT GACACTCGGC
CGCGACAGCA GCCTGGCGAT GACCCAAGAG CTCCTGGCTA ACCAGGCAGC CCCTGTACAG
ACTCAGGACG TTGCGCCGAG CGAGGCGCAA TTGAGCGATG TCGAGCGTAT TCAGCGGGCG
ATTGCCGCCG GCGACGACCC TAGTGTCAAC ACCGAAGCCC CTGCCGCGGG AAATGGCGGC
AACGGCGCGC CAGGCGCACT GGGCGGTGGC CACAGTTTTG TGTTGCTTAC CGAAGTGGCG
GATCGGGTTG ATCCGGTGGT TGGTTTTCCC ACTGCCGGTT TCAATGGCAT TCCTGAATTG
GCGAACCGCT ATGTGGGTGG CCTGGACGGC AGTGGGCGCG ACTCCTTGGG GGCTGGCAAC
GGTGGCGATG GTGGCCTGCC GCCCAATCCA CCCATCCCGC CGGTCGACGA AGACCGTCCG
GTAGAGCTCT CCGGGTTGAA TGTGAGCCCC GCCGAGCTGA TTTTGGATGA GGCCAATCTG
CCCCTGGGGT CGGCCAGCAA CCCCGCAACT CTGACTCAGC AAGGCAGCTT TACCGTGCTG
GCACCTGACG GGGTGTACAA CCTCAGTGTG GGTGGCATCA ACGTGGTGAC GGCTGGTGTG
GTGACCGGTG TTGGTCAATC GATCACCACG GGCCTGGGCA ACACCCTGAC CATTACCGGG
TATAACCCTG CAACGGGCGT GGTGAGCTAC AGCTACACCC TGACCGGTGC CGAGCAGCAC
GTCGAGGGCG CGGGCAACAA CTCACAGAGC GAACACTTGC CGGTACTGGT CAGCGACAGC
GACGGCGATG TTGCCCAAGG GTCGCTGGAC GTGGTCCTGC GTGACGATGT ACCCCAAGCC
GTGGATGACA GCAATGCGGT TGCCGCTACC GAACAGCAAA CCGAACTGAC CGGGAATGTA
CTGGGCAATG ACGTACAGGG CGCCGACCGT GTGCCCGGTG GCCCGGTAAT CGCCGGGACC
TTCACCGGTA CTTACGGCAC CTTGGTGCTG GCCGCAGACG GTTCCTATAC CTACACGCTG
AACACCAGCG ACCCGGACTT CATGAGCCTG GGCGGCGGTG GCCAGGGCGT GGAGAGTTTC
ACCTACACGA TCAAGGACGC CGACGGCGAC ACCAGCAGCG CGACACTGAC GCTGAACGTG
ACCAACCTCA ACGACCCGGT GACGCTGGAT GGGCTCGGCG TGCAGGGCGG CGAGCTGACG
GTATCTGAAA GCAACCTGCA GGACGGCAGC GCACCCGATG CCGGCGCCCT GACCCAGCAG
GGCACCTTCA AGATCACCGC ACCAGACGGT TTGCAGAGCC TGAGCGTGGG TGGCATCAGT
GTGGTCAGTG GTGGTGTGGC GGCAGGCTTC CCGCAGTCGA TCGTCACACC TGAAGGCAAC
ACCCTGACCG TGACCGGGTA TGACCCGGCG ACGGGTGTGG TGAGCTACAG CTACACCTTG
GTGGACAACG AAAACCACCC CGGCGGGGAG GGCAGCATCA GCGAAGTGTT CCAGGTGATC
GCCAAGGATG TCGATGGCAG TACTGCGACC GGCAGCCTGG ATGTGACCAT CCGTGACGAT
GTGCCCCAAG CCGTGGATGA CAGCAATGCG GTTGCCGCTA CCGAACAGCA AACCGAACTG
ACCGGGAATG TACTGGGCAA TGACGTGCAG GGCGCCGACC GTGTGCCCGG TGGCCCGGTA
ATCGCCGGGA CCTTCACCGG TACTTACGGC ACCTTGGTGC TGGCCGCAGA CGGTTCCTAT
ACCTACACGC TGAACACCAG CGACCCGGAC TTCATGAGCC TGGGCGGCGG TGGCCAGGGC
GTGGAGAGTT TCACCTACAC GATCAAGGAC GCCGACGGCG ACACCAGCAG CGCGACACTG
ACGCTGAACG TGACCAACCT CAACGACCCG GTGACGCTGG ATGGGCTCGG CGTGCAGGGC
GGCGAGCTGA CGGTATCTGA AAGCAACCTG CAGGACGGCA GCGCACCCGA TGCCGGCGCC
CTGACCCAAC AGGGCACCTT CAAGATCACC GCGCCAGACG GTCTGCAGAG CCTGAGCGTG
GGTGGCATCA GTGTGGTCAG TGGTGGTGTG GCGGCGGGCT TCCCGCAGTC GATCGTCACA
CCTGAAGGCA ACACCCTGAC CGTGACCGGG TATGACCCGG CGACGGGTGT GGTGAGCTAC
AGCTACACCT TGGTGGACAA CGAAAACCAC CCCGGCGGGG AGGGCAGCAT CAGCGAAGTG
TTCCAGGTGA TCGCCAAGGA TGTCGATGGC AGTACTGCGA CCGGCAGCCT GGATGTGAAC
ATCCGTGACG ATGTGCCCCA AGCCGTGGAT GACAGCAATG CGGTTGCCGC CACCGAACAG
CAAACCGAAC TGACCGGGAA TGTACTGGGC AATGACGTGC AGGGCGCCGA CCGTGTGCCC
GGTGGCCCGG TAATCGCCGG GACCTTCACC GGTACTTACG GCACCTTGGT GCTGGCCGCA
GACGGTTCCT ACACCTACAC CCTGAACACC AGCGACCCGG ACTTCATGAG CCTGGGCGGC
GGTGGCCAGG GCGTGGAGAG TTTCACCTAC ACGATCAAGG ACGCCGACGG CGACACCAGC
AGCGCGACAC TGACGCTGAA CGTGACCAAC CTCAACGACC CGGTGACGCT GGATGGGCTC
GGCGTGCAGG GCGGCGAGCT GACGGTATCT GAAAGCAACC TGCAGGACGG CAGCGCACCC
GATGCCGGCG CCCTGACCCA ACAGGGCACC TTCAAGATCA CCGCACCAGA CGGTTTGCAG
AGCCTGAGCG TGGGTGGCAT CAGTGTGGTC AGTGGTGGTG TGGCGGCAGG CTTCCCGCAA
TCGATCGTCA CGCCTGAAGG CAATACCCTG ACCGTGACCG GGTATGACCC GGCGACGGGT
GTGGTGAGCT ACAGCTACAC CTTGGTGGAC AATGAAAACC ACCCCGGCGG GGAGGGCAGC
ATCAGCGAAG TGTTCCAGGT GATCGCCAAG GATGTCGATG GCAGTACTGC GACTGGCAGC
CTGGACGTGA ATATCGTCGA CGATCTACCT CAGGCTGATG ACGATCAGGC TACCGTGGCT
AAAGGCGGTG TGGTGTATGG CAACGTGATG TACAACGACG TGGTTGGCGC TGACATCCGT
GGCGACGGCC AATATGTGGT CGGTGTGCGC GCCGGTAGCG ATACCTCCAC GTCGGCTATC
GGCCAGCTCA ACACCCAGGT CAATGGCCAG TACGGCTACC TGACCATCGA TGCCCAGGGC
AACGCCGAGT ACCACTCCAA CCCCAATGTC ACCTCACCAC GGGATGCCGT CGATACCTTC
GTCTATACCA TTCGCGACGC CGATGGCGAC GAAAGCACCA CTACCATCAC CATCAACGTG
CACAATTCGT TGATGGCTTG CGAAGATCGT GACATCACTG TTCACGAGAA AGCACTGGAC
CTGCAAAAGG ACGGTAACGA CCTGGCCGCC GGCAATGTCA CCGGGAGCGA CCCGGGTTCG
AGCCAGGAAA CCACATCCGG CACATTGGTC GGTTCAGCCA GCGGCGGGGT AGGTGCGCTC
ACCTACGCAC TGGTCGGAAA TGCCGTAGGC CAATACGGCC AGATTCAGCT CAATGCTGAT
GGCTCCTACA CCTATACGCT GACCTCGCCA GCGAACTCCC CGACCCATGC CAACGACGGC
GCCAACACCG TAACCGAAAC CTTCACCTAC CAGGTCCAGG ACTCACTGGG TAATTCGACC
ACCAGCACCA TCGTCATAAC CATCGTCGAC GACGTGCCTA CAGCCAACAG CGATTTCGTC
AGCGTGGCCA AGGGCGATGT GGTGTACGGC AATGTGATGT ACAACGACGT GGTGGGCGCT
GACATCCGCA GCGACGGCCA GTATGTGGTC GGCGTGCGTG CCGGTAGCGA TACCTCCACG
TCGGCTATCG GCCAGCTCAA CACCCAGGTC AACGGCCAGT ACGGCTACCT GACCATCGAT
GCCCAAGGCA ACGCCGAGTA CCACTCCAAC CCCAACGTCA CCTCGCCGCG GGATGCCGTC
GATACCTTCG TCTATACCAT TCGCGACGCC GATGGCGACG AAAGCACCAC GACCATAACC
ATCAATGTGC ATAGTTCGTT GATGACCTGC GCGGACCACG ACGTCACGGT CTACGAGAAA
GCTCTGGACC TGCACAAGGA CGGTGGCGAC CTGGCCGCCG GCACTGTGAC TGGCAGTGAC
CCAGCATCGC ACCAGGAAAC GGCCTCTGGC ACCCTGGCCG GCTCGACCAG TGGCGGGGTC
GGCGCACTGA CCTACACCTT GGTCGGCAAT GCTGTCGGCC AGTACGGTCA GATCCTGCTG
AACGCTGATG GCTCCTACAC CTACACCCTG ACCTCGCCAG CGAACTCGCC GACCCATGCC
AACGACGGCG CCAATACCGT GACTGAAACC TTCACCTACC AGGTGCAGGA TTCTCAGGGT
AATTCGACCA CCAGCACGAT CGTCATCAGC ATCGTCGACG ATGTACCGAC GGCTAACGCC
GATTTCGTCA GTGTCGCCAA AGGTGATGTG GTCAGCGGCA ATGTCATGTA CAACGATGTG
GTCGGTGCCG ACACCCTGAG CGATGGCAAG TACGTGGTAG GCGTGCGCGC TGGCAACGAT
ACCTCAAGCT CTGCGCTCGG CCAGCTCGAC AGTCAGGTGC ATGGCCAGTA CGGCTATCTG
ATCATCGATG CCCAAGGCAA TGCCGAGTAC CACTCCAATC CCGATGCCGT AGCGCCGCGG
GATGCGCTGG ATACTTTCGT CTACACCGTT CGTGATGCCG ACGGCGACGA GAGCACCACG
ACCATCACCA TCAATGTGCA CAACCCTTCA CTGCAGCCAT GTGGTGACGG GGGCGTCAAG
GTCTACGAAA ACGCGCTGGA CCTGCATCGG GATGGCCACG ACCTGGCTGC TGGAACTGTC
ACCGGCAGCC ACCCCGAGTC GACCCGCGAG ACCGCTTCCG GCAGCCTGGT CGGCCAGGTC
GCAGGAGGCG TGGGGGCGTT GACCTACACC TTGGTCGGTG ATGCCGTTGG CCAATACGGC
CAGTTGCTCC TCAATGCTGA TGGTTCATAT ACCTACACCC TTACCTCGCC GGCGAACTCG
CCGAACCATG CCAACGACGG CGCCAATACC GTCACCGAAT CCTTCACCTA CCGGGTGCAG
GACACGGTGG GCAACTGGAC CACCAGCAGC GTCAGCATCA CCATCGTCGA TGACGTCCCG
CAAGCCCATT GCGATTTCGT CAGCGTGGGC AAGGGCGACA TCGTGCGCGG CAACGTGATG
TATAACGATG TGGTGGGTGC CGATACCTCG AGTGACGGCG CCTATGTGAT TGGCGTGCGC
GCGGGGCATG ACACCTCCAC CTCTGCCAGC GGCCAGCTCG ACAGCCATGT GTATGGGCAG
TACGGCTACC TGACCCTCGA TGCCAAGGGC AACGCCGAGT ATCACTCCAA CCCCAATGCC
GTAGCGCCGC GGGATGCGCT CGACACCTTT GTTTACACCA TTCGCGATGC CGACGGCGAC
GAAAGTACCG CTACCGTGAC CATCAACGTA CATGACCAGT CGCTTCAACC CTGTGGCGAC
GGTGGGGTCA CGGTTTACGA AAAAGCGCTT GACCTGACCA AGGATGGCCA CGACCTGGCG
GCAGGGAGTG TCAACGGCAG TGAGTCTTGC TCGACTGCCG AAACGGCTGT CGGCAGCCTG
GTCGGACAGG TCGGTGGCGG CGTCGGTGCT TTGACCTACA GCCTGATAGG CAATGGCATA
GGCGAGTACG GTCAGATCCA CCTGAACGCA GACGGCTCCT ACACCTACAC CCTGACTTCG
CCAGCGAATT CGCCGACCCA TGCCAACGAT GGTGCCAATA CCGTCGGTGA GTCGTTTACT
TACAGGGTCG AGGATACGCA AGGTAACTGG ACCACCAGCA GTGTCACCAT CACTATCGTG
GATGACGTGC CGCAGGCCCA TTGCGATTTT GTAAGTGTCA GCAAAGGTGA GGAGGTGCGT
GGCAATGTCC TGTCCAACGA TGTGATCGGC GCTGACGTGC CGGGCGATTG CGGCTACGTG
GTGGGCGTAC GCGCTGGCGA TGACACCTGC ACCTCGGCTA TAGGTCAGCT CGGCAGCCAG
GTGGTTGGCC AGTATGGTTT CCTCATACTG GACGCCAGGG GGAATGCGGT TTACCACTCC
GACCCGAGCG TCGTGGCACC GCGGGATGCT ACCGACACCT TCGTCTACAC CATTCGTGAT
GCTGATGGTG ACGAAAGCAC CGCGACCATC ACGATCAACG TGCACGACAA TTCGATAGCC
GAATGTGGCG CCGGGTACGG TAGGGGGCAG GAGCAACGGG TTGTCGATCG CAGCGCGTTC
ACCCTCGATA CCAGCAGCAT GACCGCGGCG CTGGTGGTGC TCGGCTACCT GGGCGCGTCC
GGCATGGTCA ACGCCCAAGG CAATGCCGAA GAAGTGATCA ATGTCACCCT GCGCAAAGGT
GAAGCCCTGC AGCTGAATCA CACGCCCGAT GGCGGCGACC TGGCAATGCA GTGGAAGGAT
GCCGGTGGCA GCTACCAGGC CATCGCCTCA GGCGACAGCT TCACTGCCAG CCATGACGGG
GTGTACAGCA TTCACCTCAG CGACCCGTTG GGTGCAGGCA AAGGCAGCGA GAGCTACACA
CTTAACATGG TCCTCGACTA CGCCAATGCG CAGGACGCGG CCCCGCTCAC GGGCGCTGGC
AGTGAGCACT TCACTGCTGG AGTCATCGAC ATTGCGTCGC TTGAAGCGCA TGCCGCCGCT
GCCCAGGGGG CGAGCGCTAC GGCTGACTAT GCTCAAGCCG AGGGCGCGGT CACCGTCGAC
CTCAGCCTTG AAGGGCCGCA GGACACAGGA GGTGCGGGCG TTGAAACCTT GAGTGGCATT
TACAACCTGA TCGGCTCGGA CTTTGGCGAC ACCTTGATCG GCAACAGTGC CGACAACGTG
CTCAACGGCG GTGCAGGCAA TGATGTGCTC ACAGGGGGAG GCGGCAATGA CATTTTGACC
GGTGGCAATG GCAGCGACAC GTTCGTATGG CAGAAGAACG ACAGCGGCCA TGACACGCTC
AACGATTTCA CCCCAGGCAG CGACAAGCTC GACCTGTCGC AGCTGTTGCA GGGTGAACAC
GCCACGGCGG CGTCCCTGGA TGACTACCTG CACTTCAAGG TCAGTGGCGC CGGGGCGACT
GTGGTATCGA CCATCGAAGT GAGCAGCGTG GCGGGGGCGG CGCCGACGCA GACGATCGAC
CTGGCCGGCG TTGACCTCGC GCAGCACTAC GGTGTGACGG CAGGGGCGGG CGGGGTGATA
TCGGCGGGGC CGGATACGGC GACCATCATC AACGGGATGA TCGATGATCA TTCGTTGAAG
GTGGACACGG TGTGA
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| Protein sequence | MAKLVGVVSK VMGQVFAVGS DGSRRPLIEG DRLYAGEQLQ TGLAGAVAVR LDNGAELTLG
RDSSLAMTQE LLANQAAPVQ TQDVAPSEAQ LSDVERIQRA IAAGDDPSVN TEAPAAGNGG
NGAPGALGGG HSFVLLTEVA DRVDPVVGFP TAGFNGIPEL ANRYVGGLDG SGRDSLGAGN
GGDGGLPPNP PIPPVDEDRP VELSGLNVSP AELILDEANL PLGSASNPAT LTQQGSFTVL
APDGVYNLSV GGINVVTAGV VTGVGQSITT GLGNTLTITG YNPATGVVSY SYTLTGAEQH
VEGAGNNSQS EHLPVLVSDS DGDVAQGSLD VVLRDDVPQA VDDSNAVAAT EQQTELTGNV
LGNDVQGADR VPGGPVIAGT FTGTYGTLVL AADGSYTYTL NTSDPDFMSL GGGGQGVESF
TYTIKDADGD TSSATLTLNV TNLNDPVTLD GLGVQGGELT VSESNLQDGS APDAGALTQQ
GTFKITAPDG LQSLSVGGIS VVSGGVAAGF PQSIVTPEGN TLTVTGYDPA TGVVSYSYTL
VDNENHPGGE GSISEVFQVI AKDVDGSTAT GSLDVTIRDD VPQAVDDSNA VAATEQQTEL
TGNVLGNDVQ GADRVPGGPV IAGTFTGTYG TLVLAADGSY TYTLNTSDPD FMSLGGGGQG
VESFTYTIKD ADGDTSSATL TLNVTNLNDP VTLDGLGVQG GELTVSESNL QDGSAPDAGA
LTQQGTFKIT APDGLQSLSV GGISVVSGGV AAGFPQSIVT PEGNTLTVTG YDPATGVVSY
SYTLVDNENH PGGEGSISEV FQVIAKDVDG STATGSLDVN IRDDVPQAVD DSNAVAATEQ
QTELTGNVLG NDVQGADRVP GGPVIAGTFT GTYGTLVLAA DGSYTYTLNT SDPDFMSLGG
GGQGVESFTY TIKDADGDTS SATLTLNVTN LNDPVTLDGL GVQGGELTVS ESNLQDGSAP
DAGALTQQGT FKITAPDGLQ SLSVGGISVV SGGVAAGFPQ SIVTPEGNTL TVTGYDPATG
VVSYSYTLVD NENHPGGEGS ISEVFQVIAK DVDGSTATGS LDVNIVDDLP QADDDQATVA
KGGVVYGNVM YNDVVGADIR GDGQYVVGVR AGSDTSTSAI GQLNTQVNGQ YGYLTIDAQG
NAEYHSNPNV TSPRDAVDTF VYTIRDADGD ESTTTITINV HNSLMACEDR DITVHEKALD
LQKDGNDLAA GNVTGSDPGS SQETTSGTLV GSASGGVGAL TYALVGNAVG QYGQIQLNAD
GSYTYTLTSP ANSPTHANDG ANTVTETFTY QVQDSLGNST TSTIVITIVD DVPTANSDFV
SVAKGDVVYG NVMYNDVVGA DIRSDGQYVV GVRAGSDTST SAIGQLNTQV NGQYGYLTID
AQGNAEYHSN PNVTSPRDAV DTFVYTIRDA DGDESTTTIT INVHSSLMTC ADHDVTVYEK
ALDLHKDGGD LAAGTVTGSD PASHQETASG TLAGSTSGGV GALTYTLVGN AVGQYGQILL
NADGSYTYTL TSPANSPTHA NDGANTVTET FTYQVQDSQG NSTTSTIVIS IVDDVPTANA
DFVSVAKGDV VSGNVMYNDV VGADTLSDGK YVVGVRAGND TSSSALGQLD SQVHGQYGYL
IIDAQGNAEY HSNPDAVAPR DALDTFVYTV RDADGDESTT TITINVHNPS LQPCGDGGVK
VYENALDLHR DGHDLAAGTV TGSHPESTRE TASGSLVGQV AGGVGALTYT LVGDAVGQYG
QLLLNADGSY TYTLTSPANS PNHANDGANT VTESFTYRVQ DTVGNWTTSS VSITIVDDVP
QAHCDFVSVG KGDIVRGNVM YNDVVGADTS SDGAYVIGVR AGHDTSTSAS GQLDSHVYGQ
YGYLTLDAKG NAEYHSNPNA VAPRDALDTF VYTIRDADGD ESTATVTINV HDQSLQPCGD
GGVTVYEKAL DLTKDGHDLA AGSVNGSESC STAETAVGSL VGQVGGGVGA LTYSLIGNGI
GEYGQIHLNA DGSYTYTLTS PANSPTHAND GANTVGESFT YRVEDTQGNW TTSSVTITIV
DDVPQAHCDF VSVSKGEEVR GNVLSNDVIG ADVPGDCGYV VGVRAGDDTC TSAIGQLGSQ
VVGQYGFLIL DARGNAVYHS DPSVVAPRDA TDTFVYTIRD ADGDESTATI TINVHDNSIA
ECGAGYGRGQ EQRVVDRSAF TLDTSSMTAA LVVLGYLGAS GMVNAQGNAE EVINVTLRKG
EALQLNHTPD GGDLAMQWKD AGGSYQAIAS GDSFTASHDG VYSIHLSDPL GAGKGSESYT
LNMVLDYANA QDAAPLTGAG SEHFTAGVID IASLEAHAAA AQGASATADY AQAEGAVTVD
LSLEGPQDTG GAGVETLSGI YNLIGSDFGD TLIGNSADNV LNGGAGNDVL TGGGGNDILT
GGNGSDTFVW QKNDSGHDTL NDFTPGSDKL DLSQLLQGEH ATAASLDDYL HFKVSGAGAT
VVSTIEVSSV AGAAPTQTID LAGVDLAQHY GVTAGAGGVI SAGPDTATII NGMIDDHSLK
VDTV
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