| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3805 |
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| Symbol | |
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| ID | 6112769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4229151 |
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| End bp | 4231295 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641623596 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001750656 |
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| Protein GI | 170722968 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.824216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000305051 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCGAAC AGGCTCAGCG CGTTCTCAAG GATATCTTCG GTTACGACAG TTTCCGTGGG
CGCCAGGCAG CAATCATCGA ATGCGTGGCC AATGGCGGCG ATGCCCTGGT GCTGATGCCC
ACCGGTGGCG GCAAGTCGCT GTGTTTTCAG GTACCGGGGC TGTTGCGCCC GGGCCTGACC
GTGGTGGTGT CGCCGCTGAT CGCGCTGATG GACGATCAGG TCGCTACTCT CGATGAACTC
GGGGTCGCGG CTGCGGCCCT GAACTCTACC CTCAGTGCGG AACAACAGCG TGATCTCGCC
GGGCGCCTGC GCCGCGGTGA AGTGAAGATG CTTTACCTGG CGCCTGAGCG CCTGGTGCAG
CCGCGGATGC TGGATTTCCT TCGCGGTCTG GACGTTTCCC TGTTCGCCAT CGACGAGGCC
CACTGCGTTT CGCAATGGGG CCACGATTTC CGCCCGGAGT ACTTGCAACT GGGCCAGTTG
GCCGAGCTGT TCCCGCATGT GCCGCGCATC GCCCTGACCG CCACCGCCGA CATGCGTACC
CGCGAGGAAA TCGTCCAGCG CCTGCACCTG CAGGGCGCCG AACGCTTCCT GTCGAGCTTC
GATCGGCCAA ATATCTTCTA CCGCATCGTG CCCAAGGAGT CGCCGCGCAA GCAGTTGATG
GCCTTCCTCG GCGAGCGCCG CGGCAACGCC GGTATCGTCT ACTGCCTGTC ACGCAAGAAG
GTCGATGAGA CCGCTGCCTA CCTGTGCGAC CAAGGCTTCC CGGCGTTGCC GTACCACGCC
GGCCTGGCTG CTGAAACCCG TTCGGCCAAC CAGCACCGCT TCCTCAACGA GGAAGGGCTG
ATCATGGTCG CCACCATCGC CTTCGGCATG GGCATCGACA AGCCCAACGT ACGCTTCGTC
GCCCACCTCG ACCTGCCCAA GTCGCTCGAG GCCTATTACC AGGAGACGGG GCGTGCCGGC
CGCGATGGCC TGCCGTCCGA TGCCTGGATG GCCTACGGCC TGCAGGACAT GGTGATGCTC
AAACAGATGC TGCAGAACTC CGATGGGGAC GAGCGCCACA AGCGCGTTGA GCAACACAAG
CTCGACGCCA TGCTTGCACT GTGCGAGGAA ACCCGTTGTC GCCGCCAGGC GTTGCTGGCC
TATTTCGATG AAGTACTCGA ACAGCCCTGC GGGCATTGCG ACAACTGCGT CGACCAGATC
CAGACCTGGG ATGCCACCGA GCCTGCGCGC CAGGCCCTGT CGGCGGTGTT CCGTACCGGC
CAGCGTTACG GTGTCGGCCA CCTGATCGAT GTGCTGCTGG GCAAGGATAC CGAGAAGGTG
CGCAATTTCG GTCACGAGAA ACTCTCGGTG TTTGGTGTTG GCAAGGCGAT GGCCGAGGTT
GAATGGCGTT CGCTGTTCCG CCAGTTGGTG GCGCGCGGCC TGGTCGACAT CGATCTGGAA
GGCTACGGTG GCCTGCGCCT GTCCGACAGC TGCAGGCCGC TGCTGCGCGG CGAAGTGACC
TTACAGTTGC GTCGCGACCT CAAGCCGCAG ACAGTGGCTA AAACGGCCTC CGGCGGCGGC
AGCCCGGCCA GCCAGCTGGT GCGCGCCGAA GAGCGCGAAC TGTGGGAAGC GCTGCGCACG
TTGCGTCGCA AACTGGCCGA AGAGCACAGC GTGCCGCCTT ATGTCATCTT CCCGGACTCC
ACGCTGCTGG AGATGCTGCG CAGCCAGCCG GCCAGCCTCA GCGACATGGC TCAGGTCAGC
GGCGTGGGGG CGCGCAAGCT GGAGCGCTAC GGCCAGGCCT TCCTCGAAGT GCTCAATGAC
GCCGGTGGCA CCACCGAGGC GCCCAAGGTG GTACTCGATC TGCGCCACGA ACTGGTCAGC
CTGGCCCGTG CCGGCATGAC CCCGGCGCAA ATCGCCGGCC AGCTCAATTG CAGCGAAAAG
AACGTCTACA GCCTGCTGGC CGAGGCTATT GGTCGCCAGG AACTGAGCCT GGACCAGGCA
CTGGACCTGC CTGAAGACTT GATGATGGAA GTGCAGGATG CCTTCCTTGA TGGCGAAGGC
GAGCTGCCAC CTGTCTCGGC CATTGCTCCG CTGTTCGGCG CGCGCATACC CGAGGGTGTG
CTGTACTGCG TGCGCGCTGC GCTGGCTGCG GAATTTGAGC TTTGA
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| Protein sequence | MLEQAQRVLK DIFGYDSFRG RQAAIIECVA NGGDALVLMP TGGGKSLCFQ VPGLLRPGLT
VVVSPLIALM DDQVATLDEL GVAAAALNST LSAEQQRDLA GRLRRGEVKM LYLAPERLVQ
PRMLDFLRGL DVSLFAIDEA HCVSQWGHDF RPEYLQLGQL AELFPHVPRI ALTATADMRT
REEIVQRLHL QGAERFLSSF DRPNIFYRIV PKESPRKQLM AFLGERRGNA GIVYCLSRKK
VDETAAYLCD QGFPALPYHA GLAAETRSAN QHRFLNEEGL IMVATIAFGM GIDKPNVRFV
AHLDLPKSLE AYYQETGRAG RDGLPSDAWM AYGLQDMVML KQMLQNSDGD ERHKRVEQHK
LDAMLALCEE TRCRRQALLA YFDEVLEQPC GHCDNCVDQI QTWDATEPAR QALSAVFRTG
QRYGVGHLID VLLGKDTEKV RNFGHEKLSV FGVGKAMAEV EWRSLFRQLV ARGLVDIDLE
GYGGLRLSDS CRPLLRGEVT LQLRRDLKPQ TVAKTASGGG SPASQLVRAE ERELWEALRT
LRRKLAEEHS VPPYVIFPDS TLLEMLRSQP ASLSDMAQVS GVGARKLERY GQAFLEVLND
AGGTTEAPKV VLDLRHELVS LARAGMTPAQ IAGQLNCSEK NVYSLLAEAI GRQELSLDQA
LDLPEDLMME VQDAFLDGEG ELPPVSAIAP LFGARIPEGV LYCVRAALAA EFEL
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