Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3802 |
Symbol | |
ID | 6112766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4226019 |
End bp | 4226300 |
Gene Length | 282 bp |
Protein Length | 93 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641623593 |
Product | putative selenoprotein |
Protein accession | YP_001750653 |
Protein GI | 170722965 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3526] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02174] selT/selW/selH selenoprotein domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.522888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000000204216 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCCGACA ACAAGCCGGA AATCGTCATC ACATATTGCA CGCAGTGCCA ATGGCTGCTG CGCGCCGCCT GGCTGGCCCA GGAACTGCTC AGTACCTTCG CCGACGACCT GGCCCGGGTG GCACTGGAGC CCGCTACCGG CGGCACCTTC CGCATCACCT GCAATGGCGT GCAGATCTGG GAGCGCAAGG CTGACGGTGG TTTCCCCGAG GCCAAGGTGC TCAAGCAGCG TGTGCGTGAC CAGATCGACC CGCAGCGCGA CCTTGGGCAC ACCGATCGCT GA
|
Protein sequence | MADNKPEIVI TYCTQCQWLL RAAWLAQELL STFADDLARV ALEPATGGTF RITCNGVQIW ERKADGGFPE AKVLKQRVRD QIDPQRDLGH TDR
|
| |