| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3801 |
|---|
| Symbol | |
|---|
| ID | 6112765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 4225128 |
|---|
| End bp | 4226018 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641623592 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001750652 |
|---|
| Protein GI | 170722964 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2962] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0000000662683 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGC GTACAGCCCT GGGCGCCCTG CACATCGGCG CACTGTTCTT CGGCCTGACC
GGCGTGTTTG GCAAACTGGC CGCCAGCGCC AGCCCGGCCA TCATCGTCTT CGGCCGTGCC
GCCTTTGCCG TGTTCGCCCT GGCGCTGTTC GCCAGCCTCT CCGGCCCAGG CTGGCAGCGC
CTGCGCAGCC AGGACGTACA GCGCCTCTTG CTGGGCGGTG TGCTGCTGGC CGGCCACTGG
GTCAGCTTCT TCATCGCCGT CAAAGTCGGT GGCGTGGCTA TCGCCACCCT CGGCTTCGCC
AGTTTCCCGG CATTTACCGT GATACTCGAG GGGCTGCTGT TCCGCGAACG CATCCGCCGC
AACGAAGCAC TGCTGGTATT GCTGGTGAGC ATCGGCCTGG TTCTGGTGAC GCTCTCATTC
GACCTAGCAA GCGAAGCCAC GGGCGGACTG CTGTGGGCCC TGCTTTCCGG CCTGCTGTTC
TCGCTGTTGT CGCTGACCAA CCGGGCAGGC TCGGGGCGTT TGCCCGCCGT TCAGGCAGCG
CTGTGGCAAA ACCTCGTGGT CGGCCTGTGC CTGCTGCCGT TTGCTGTGCA TGGTCTGGGC
GCGGTGAAGC CCATGGATTG GCTGTGGATC GCCCTGCTAG GGGTTTTCTG CACGGGCGTC
GCCCACAGCC TTTTCGTCGC CAGCCTGGCA GTGATCAAGG CGCGCACTGC CGCAGTAGTT
TTCGCCATGG AACCGGTCTA CGGCATCGCT GTTGCCTGGG TGGTATTCGC CGAAACACCA
ACCCTGCGCA TGCTGCTGGG CGGCGCACTG ATCATCTTCG CCATCGTGCT TTCCAGCCGC
CTCGGCGCCG AGCAGCCGCC CAGACCACGT ACCGTGGTCG AGGGCACCTG A
|
|---|
| Protein sequence | MNQRTALGAL HIGALFFGLT GVFGKLAASA SPAIIVFGRA AFAVFALALF ASLSGPGWQR
LRSQDVQRLL LGGVLLAGHW VSFFIAVKVG GVAIATLGFA SFPAFTVILE GLLFRERIRR
NEALLVLLVS IGLVLVTLSF DLASEATGGL LWALLSGLLF SLLSLTNRAG SGRLPAVQAA
LWQNLVVGLC LLPFAVHGLG AVKPMDWLWI ALLGVFCTGV AHSLFVASLA VIKARTAAVV
FAMEPVYGIA VAWVVFAETP TLRMLLGGAL IIFAIVLSSR LGAEQPPRPR TVVEGT
|
|---|
| |