Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3796 |
Symbol | |
ID | 6112760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4220350 |
End bp | 4221804 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641623587 |
Product | TrkH family potassium uptake protein |
Protein accession | YP_001750647 |
Protein GI | 170722959 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000000285199 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCGTTGC CGACCTTAAG GATCATTGGT TTCATCATCG GCATCTTCCT GATCACCCTG GCGGTCAGCA TGGTCGTACC CATGGCGACG CTGGTGATCT TCGAACGTAC CGGCGACATG CCATCGTTCC TCTGGTCAAG CCTGATCACC TTCGTCGCAG GCTTGCTTCT GATCGTCCAG GGCCGCCCGG AGCATGTGCA CCTGCGCCCG CGCGACATGT ACCTGCTGAC CGTCAGCAGC TGGCTGGTGG TAGGCGTGTT CGCCGCCCTC CCCTTTCTGC TCACCCAGCA CATCAGCTAC ACCGACGCCT TCTTCGAAAG CATGTCCGGC ATCACTGCCA CCGGTGCCAC CGTGCTCAGC GGGCTGGACA CCATGTCGCC GGGCATACTG ATGTGGCGCT CGATGCTGCA CTGGCTCGGC GGTATCGGCT TCATCGCCAT GGCGGTGGCG ATCCTGCCGC TGCTGCGCAT CGGTGGCATG CGCCTGTTCC AGACCGAGTC GTCCGACCGC TCGGAGAAGG TCATGCCGCG CTCGCACATG GTCGCCAAGT CGATCGTCGG GGTGTACGTC TGCTTCTCGG TGCTGGGCGC CCTGGCCTTC TGGTGGGCCG GCATGAAGCC GTTCGACGCC ATCAACCACG CCATGTCAGC CATTTCCACC GGGGGGTTCT CGACCTCCGA CCAGTCCCTC GCCAAATGGG ACATCCCTGC CGTGCACTGG GTCGCGGTGG TTGTAATGAT TCTTGGCAGC CTGCCATTCG CCTTGTACGT AGCCACCCTG CGCGGCAACC GCAAGGCGCT GATTCGCGAC CAGCAGGTCC AGGGGCTGCT TGGCTTGCTG GTGGTCACCT GGCTGGTATT GGGCACCTGG TACTGGGCCA CTACCAACCT GCACTGGCTC GATGCCTTGC GCCACGTGGC GTTCAACGTG ACCTCGGTGA TCACCACCAC CGGTTTCGCG CTGGGCGACT ACAGCCTGTG GGGCAATTTT TCGCTAATGC TGTTCTTCTA CCTGGGCTTC GTCGGTGGCT GCTCTGGTTC GACCGCCGGC GGTATCAAGA TCTTCCGCTT CCAGGTGGCC TACATCCTGC TCAAGGCCAG CCTCAACCAG TTGATTCACC CACGCGCCGT GATCAAACAG AAATACAACG GCCATCGCCT GGACGAAGAG ATCGTACGTT CGATCCTGAC CTTCTCGTTC TTCTTCGCGA TCACCATCTG CGTCATGGCG TTGCTACTGT CGCTACTGGG CGTGGACTGG ATGACCGCTC TGACCGGCGC CGCCGCAACC GTTTCGGGCG TTGGCCCGGG CCTGGGTGAA GTGATAGGCC CGGCAGGCAA CTACGCCATG CTGCCGGACG CGGCCAAGTG GATTCTTGCT GGCGGCATGC TGCTCGGCCG CCTGGAGATC ATCACGGTGC TGGTGCTGTG CATGCCGGCG TTCTGGCGTC ACTGA
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Protein sequence | MALPTLRIIG FIIGIFLITL AVSMVVPMAT LVIFERTGDM PSFLWSSLIT FVAGLLLIVQ GRPEHVHLRP RDMYLLTVSS WLVVGVFAAL PFLLTQHISY TDAFFESMSG ITATGATVLS GLDTMSPGIL MWRSMLHWLG GIGFIAMAVA ILPLLRIGGM RLFQTESSDR SEKVMPRSHM VAKSIVGVYV CFSVLGALAF WWAGMKPFDA INHAMSAIST GGFSTSDQSL AKWDIPAVHW VAVVVMILGS LPFALYVATL RGNRKALIRD QQVQGLLGLL VVTWLVLGTW YWATTNLHWL DALRHVAFNV TSVITTTGFA LGDYSLWGNF SLMLFFYLGF VGGCSGSTAG GIKIFRFQVA YILLKASLNQ LIHPRAVIKQ KYNGHRLDEE IVRSILTFSF FFAITICVMA LLLSLLGVDW MTALTGAAAT VSGVGPGLGE VIGPAGNYAM LPDAAKWILA GGMLLGRLEI ITVLVLCMPA FWRH
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