| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3771 |
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| Symbol | |
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| ID | 6112735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4193092 |
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| End bp | 4194072 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641623562 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001750622 |
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| Protein GI | 170722934 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.128178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.013148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCC AGCGAATCGG TTTTCTCATC TGGCCAAGCA CCAAGCCCTT GACGTTGGCG
CTGGCGGAGG AAGTATTGCT GGTGGCCCAG CGGGTACATC CTGATGTGGT TTACGAGCTG
GCCTTTATGC AGGCCGAACC TGCGCAGGAT GGCGCCTGGC GCCTGCCGGG CGAGCCCTGG
AACGGGCGCC TGGAGGGTTG TCACAAGCTG TTCCTGCTCG CTGACGAGCT GCCCCAGGCG
CTGGGGTCGG CGCTGTCCTC GGCCCTCAAG CAATTGGCCC GTAGCGGCTG CATTATTGGC
GGGCTGTCTG CGGGTGTGTA TCCGTTGGCC ATGCTCGGCC TGCTCGATGG TTACCGCGCT
GCGGTGCATT GGCGCTGGCA AGACGATTTT GCCGAGCGCT TTCCCAAGGT CATCGCCACC
AGCCATCTGT TCGATTGGGA CCGTGATCGC CTGACCGCTT GCGGCGGTAT GGCGGTGACC
GACTTGCTGC TGGCGGTGCT GGCGCGTGAT CACGGGGCTG AGCTGGCTGG TGCGGTTTCC
GAGGAGCTGG TGGTCGAGCG CATTCGTGAG GGGGGGGAGC GCCAGCGCAT TCCGCTGCAG
AACCGCCTCG GCTCCAGCCA TCCGAAGCTG ACCCAGGCGG TGCTGTTGAT GGAAGCCAAC
ATCGAAGAGC CGCTGACCAC TGACGAAATC GCTCAGCATG TATGCGTGTC GCGCAGGCAA
CTGGAGCGTA TCTTCAAGCA GTACCTCAAT CGGGTGCCCA GCCAGTATTA CCTGGAGTTG
CGGCTGAACA AGGCGCGGCA GATGCTGATG CAGACCAGCA AATCGATCAT CCAGATCGGC
CTTTCCTGTG GCTTCTCCTC CGGCCCGCAT TTCTCCAGTG CTTACCGCAA TTTCTTTGGC
GCCACGCCAC GGGAAGACCG CAACCAGCGG CGTAACAGCA GCCCCTTCGA ATTGAGTTCG
GCGCCTGCCG AAAAGGGCTG A
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| Protein sequence | MTTQRIGFLI WPSTKPLTLA LAEEVLLVAQ RVHPDVVYEL AFMQAEPAQD GAWRLPGEPW
NGRLEGCHKL FLLADELPQA LGSALSSALK QLARSGCIIG GLSAGVYPLA MLGLLDGYRA
AVHWRWQDDF AERFPKVIAT SHLFDWDRDR LTACGGMAVT DLLLAVLARD HGAELAGAVS
EELVVERIRE GGERQRIPLQ NRLGSSHPKL TQAVLLMEAN IEEPLTTDEI AQHVCVSRRQ
LERIFKQYLN RVPSQYYLEL RLNKARQMLM QTSKSIIQIG LSCGFSSGPH FSSAYRNFFG
ATPREDRNQR RNSSPFELSS APAEKG
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