| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3770 |
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| Symbol | argD |
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| ID | 6112734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4191577 |
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| End bp | 4192797 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641623561 |
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| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
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| Protein accession | YP_001750621 |
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| Protein GI | 170722933 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0233516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTTG AGCAAGCCCC GGTGCAACGT GCCGATTTCG ACCAGGTCAT GGTCCCCAAC
TATTCTCCGG CGGCCTTCAT TCCTGTGCGA GGCGAGGGTT CCCGCGTCTG GGACCAGTCG
GGTCGCGAAC TCATCGACTT TGCCGGTGGC ATTGCGGTAA ACGCCCTGGG CCACTGCCAC
CCGGCACTGG TCAAGGCCCT GACCGAGCAG GCCAACACCC TCTGGCACGT TTCCAACGTC
TTCACCAACG AGCCAGCACT GCGCCTGGCA CACAAACTGG TCGATGCCAC CTTTGCCGAC
CGGGCTTTTT TCTGCAACTC CGGCGCTGAG TCCAACGAGG CCGCTTTCAA GCTGGCCCGT
CGTGTCGCCC ATGACCGCTT CGGTCCCGAC AAGCACGAAA TCATCTCCGC CGTGAACAGC
TTCCACGGTC GCACGCTGTT CACCGTCAGT GTCGGCGGCC AGCCGAAGTA CTCTGACGGT
TTCGGCCCGA AGATTACCGG TATCAGTCAT GTGCCCTACA ACGACCTGGA AGCGCTGAAG
GCACAGATTT CCGACAAGAC CTGCGCCGTG GTGATCGAGC CGATCCAGGG CGAGAGCGGT
GTGGTCCCGG CCGACAAGGC GTACCTGGAA GGCGCCCGCA AGCTGTGTGA CGAGCACAAC
GCCCTGCTGA TCTTCGATGA AGTGCAGACG GGTGTGGGTC GTACCGGCTC GCTGTACGCC
TATCAGCACT ACGGCGTGAC GCCAGACATC CTGACCAGCG CCAAGAGCCT GGGCGGTGGT
TTCCCGATCG GTGCCATGCT CACCACCAGT GAGCTTGCCA AGCATCTGGC GGTCGGCACC
CACGGCACTA CCTATGGCGG TAACCCGTTG GGCTGCGCCG TTGCCTGCGC GGTGCTGGAC
GTGATCAACA CCCCAGAAAC CCTGGCCGGT ATCAAAGCCA AGCACGAGCG CTTCAAGGTG
CGCCTTGAGA AGATCGGCCA GCAGGCCGGC CTGTTCTCTC AGGTGCGTGG TGTCGGCCTG
TTGATCGGCT GCGTGCTGAC CGAAGCCTGG CAGGGCAAGG CCAAGGACAT CCTCAATGCC
GCCGAGAAGG AAGGCGTGAT GGTGCTGCAG GCCGGCCCGG ACGTGGTGCG CTTCGCGCCG
AGCCTGGTGA TCGAAGATGC CGATATCGAT GAAGGCCTGG ACCGCTTCGA GCGGGCTGTG
GCCAAACTGA CCCAGGCCTG A
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| Protein sequence | MSVEQAPVQR ADFDQVMVPN YSPAAFIPVR GEGSRVWDQS GRELIDFAGG IAVNALGHCH
PALVKALTEQ ANTLWHVSNV FTNEPALRLA HKLVDATFAD RAFFCNSGAE SNEAAFKLAR
RVAHDRFGPD KHEIISAVNS FHGRTLFTVS VGGQPKYSDG FGPKITGISH VPYNDLEALK
AQISDKTCAV VIEPIQGESG VVPADKAYLE GARKLCDEHN ALLIFDEVQT GVGRTGSLYA
YQHYGVTPDI LTSAKSLGGG FPIGAMLTTS ELAKHLAVGT HGTTYGGNPL GCAVACAVLD
VINTPETLAG IKAKHERFKV RLEKIGQQAG LFSQVRGVGL LIGCVLTEAW QGKAKDILNA
AEKEGVMVLQ AGPDVVRFAP SLVIEDADID EGLDRFERAV AKLTQA
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