| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3767 |
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| Symbol | astD |
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| ID | 6112731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4187870 |
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| End bp | 4189333 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641623558 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | YP_001750618 |
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| Protein GI | 170722930 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.157209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0254009 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGC ATTACATCGC CGGCAGCTGG CAGGCCGGCC AGGGTGAAGC CCTGCAGTCG
CTCAACCCGG TCACGCAAGC CGTTGTCTGG CAAGGGCAGG GCGCCGATGC CAGCCAGGTC
GACGCTGCCG TGCTGGCCGC GCGTCAGGCT TTTCCGGCCT GGGCGCAACT GAGCCTGGAG
GCGCGCATCG ACGTGCTGGA AAAGTTTGCC GAACAGCTCA AGCAGCATTC CGAGGCACTG
GCCTACTGCA TTGGCGAGGA AACCGGCAAA CCGCTGTGGG AATCGGCTAC CGAAGTCACC
AGCATGGTCA ACAAGGTCGC GATCTCGATA CAGAGCTACC GCGAGCGTAC GGGCGAGAAA
AGCGGCCCGC TAGCCGATGC TACCGCCGTA CTGCGGCACA AGCCCCACGG GGTGGTGGCG
GTGTTCGGCC CCTACAATTT CCCCGGCCAC TTGCCCAATG GTCACATTGT CCCGGCGCTG
CTGGCCGGTA ACTGTGTGGT GTTCAAGCCC AGCGAACTGA CCCCCAAGGT CGCCGAGCTG
ACAGTCAATT GCTGGATCGC CGCGGGCCTG CCGGCCGGTG TGCTCAACCT GGTGCAGGGC
GCACGTGAAA CGGGCGTGGC GCTGGCTGCC AACCCAGGTA TCGATGGCTT GTTCTTCACT
GGCTCAAGCC GTACCGGCAA CCTGCTTCAT CAGCAGTTTG CCGGCCGTCC GGACAAGATC
CTCGCCCTGG AAATGGGCGG CAACAACCCG TTGGTGGTGG ATGGGGTCAA GGACCTCGAC
GCGGCGGTAT ACACGATCAT CCAGTCGGCG TTCATCTCCG CTGGGCAGCG CTGCACCTGT
GCTCGCCGTC TGCTGGTGCC GCAGGGCGCA TGGGGCGATG CGCTGGTCAT ACGGTTGGTC
GAGGTGTGCA AAAGCATCAC GGTCGGCGCT TTTGATCAGC AGCCGGCACC CTTCATGGGT
TCGGTGATTT CGCTGCAGGC TGCGCGGGCG CTGGTCGCGG CGCAGTCTGA GCTGCTCGCC
AAGGGCGCTA CCCAGTTGCT GGAGATGACC CAGCCCCAGG CCGATGCCGC ACTGCTGACC
CCGGGCATCA TCGATGTCAC CGCCGTGGCG GACCGGCCCG ACGAAGAGTT TTTCGGCCCG
CTGCTGCAGG TGATTCGTTA CGCCGACTTC GATGCTGCCA TCGACGAGGC CAACAACACT
CAGTACGGTC TGGCCGCCGG CCTGTTGTCC GACTCCCGTG CCCGCTACCA GTACTTCTGG
CTGCGCAGCC GCGCCGGCAT CGTCAACTGG AACAAGCAAC TGACCGGTGC CGCCAGCAGC
GCGCCGTTCG GGGGGATAGG CGCCAGTGGC AATCATCGCG CCAGCGCCTA TTACGCCGCC
GACTACTGCG CTTACCCCGT GGCTTCGCTG GAGACTGCCA GCCTTGCCCT GCCGGCGACC
CTGACGCCGG GCGTCACCCT ATAA
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| Protein sequence | MTTHYIAGSW QAGQGEALQS LNPVTQAVVW QGQGADASQV DAAVLAARQA FPAWAQLSLE
ARIDVLEKFA EQLKQHSEAL AYCIGEETGK PLWESATEVT SMVNKVAISI QSYRERTGEK
SGPLADATAV LRHKPHGVVA VFGPYNFPGH LPNGHIVPAL LAGNCVVFKP SELTPKVAEL
TVNCWIAAGL PAGVLNLVQG ARETGVALAA NPGIDGLFFT GSSRTGNLLH QQFAGRPDKI
LALEMGGNNP LVVDGVKDLD AAVYTIIQSA FISAGQRCTC ARRLLVPQGA WGDALVIRLV
EVCKSITVGA FDQQPAPFMG SVISLQAARA LVAAQSELLA KGATQLLEMT QPQADAALLT
PGIIDVTAVA DRPDEEFFGP LLQVIRYADF DAAIDEANNT QYGLAAGLLS DSRARYQYFW
LRSRAGIVNW NKQLTGAASS APFGGIGASG NHRASAYYAA DYCAYPVASL ETASLALPAT
LTPGVTL
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