| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3763 |
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| Symbol | alaS |
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| ID | 6112727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4182212 |
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| End bp | 4184905 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641623554 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001750614 |
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| Protein GI | 170722926 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.469111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.276016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCCCT TTGCCGTCGT TTCGTCGACG CGTTTGCCCC CAGGGGCCGC CGTTTCCGTG
GAAGAACCTA TGAAAAGCGC AGAAATCCGT GAAGCCTTCC TTCGCTTCTT CGAAGAGCAG
GGCCATACCC GAGTCGCCTC CAGTTCGCTG ATCCCGAACA ACGACCCGAC CCTGCTGTTC
ACCAACGCAG GCATGAACCA GTTCAAGGAC TGCTTCCTCG GTGCCGAGAA GCGCGCCTAC
ACCCGTGCGG TCAGCAGCCA GAAGTGCGTG CGCGCCGGCG GCAAGCATAA CGACCTGGAA
AACGTCGGTT ACACCGCGCG TCACCACACC TTCTTCGAGA TGCTGGGCAA CTTCAGCTTC
GGCGACTATT TCAAGCGCGA TGCGATCACT TTCGCCTGGA CCTTCCTGAC TTCCGACAAG
TGGCTGAACC TGCCCAAGGA AAAGCTCTGG GTCACCGTCT ACGCCAGCGA CGACGAAGCC
TACGACATCT GGACCAAGGA AGTCGGCGTG CCGGCCGAGC GCATGGTGCG CATCGGTGAC
AACAAAGGCG CCCCTTACGC CTCCGACAAC TTCTGGACCA TGGGCGACAC CGGCCCGTGT
GGCCCTTGCA CCGAGATCTT CTACGACCAC GGTGCCGATA TCTGGGGCGG CCCACCCGGT
TCCCCTGAAG AAGACGGCGA CCGCTACATC GAGATCTGGA ACAACGTCTT CATGCAGTTC
AACCGCACTG CCGATGGCGT GCTGCACCCG CTGCCAGCGC CGTCGGTGGA TACCGGCATG
GGCCTGGAGC GCATCAGTGC GGTCATGCAG CACGTGCACT CGAACTACGA GATCGACCTG
TTCCAGAACC TGCTGAGCGC TGCGGCCAAG GCCATCGGCT GCAGCAACGA CGGTCAGGCT
TCGCTGAAAG TCGTGGCCGA CCACATCCGC TCTTGCGGCT TCCTGATCGC AGACGGCGTG
CTGCCCTCCA ACGAAGGCCG TGGCTACGTG CTGCGCCGCA TCATTCGTCG TGCCTGCCGT
CACGGTAACA AGCTGGGCGC CAAGGGCAGC TTCTTCTACC AGATCGTCGC CGCCTTGGCT
GCCGAGATGG GCGAGGCGTT CCCGGAGCTC AAGAGCCAGC AAGCGCACAT CGAGCGCGTG
CTCAAGGCCG AAGAAGAACA GTTCGCCAAG ACCCTCGAGC AGGGCCTGCG CATCCTCGAG
CAGGATCTGG CCCAGCTCAA GGGCGACGTA GTGCCGGGTG ACGTGGTGTT CAAGCTGTAC
GACACCTACG GCTTCCCGAT GGACCTGACC GCCGACATCG CCCGCGAGCG CGAGCTGACC
ATCGATGAAG CGGGCTTCGA GCGTGAAATG GATGCCCAGC GTGAGCGCGC CCGTTCCGCC
AGTGCCTTCG GCATGGATTA CAACAGCCTG GTCAAGGTCG ACACCGCTAC CGACTTCGTC
GGCTACAACG CCACCGAAGG TCAGGGCAAG GTCATTGCCC TGTACAAGGA CGGCCAGTCG
GTCGACCAGT TGGGCGAGGG CGAGCAGGGC GTCGTGGTGC TGGACCGCAC CCCGTTCTAT
GCCGAGTCCG GTGGCCAGGT TGGTGACACC GGCTACCTGC AGTCGGGCGC CGTACGCTTT
GACGTGCAGG ACACCACCAA GACCGGCGGC GCTTTCCTGC ACCATGGCGT GGTCGCCAGC
GGCGCGCTGG TGATCGGTTC TCCGGTCGAA GCCAAGGTCG ATGCCGACGT GCAGCACGCC
ACCTCGCTGA ACCACTCGGC CACGCACCTG CTGCACGAAG CGCTGCGTCA GGTACTGGGC
GAGCACGTGC AGCAGAAGGG CTCGCTGGTC GACAGCCAGC GTCTGCGTTT CGACTTCAGC
CACTTCGAGG CGGTGACGCC TGCGCAGATC AAGGCACTGG AAGACATCGT CAACCGCGAA
GTGCGCAAGA ACACCCCGGT GGAAACTGAA ATCACCGATA TCGAAACCGC CAAGCGCAAA
GGCGCGATGG CCCTGTTTGG CGAGAAATAC GGCGATACCG TGCGCGTGCT GAGCATGGGT
GGCGATTTCT CCGTCGAGCT GTGCGGCGGG ATCCACGCCA AGCGCACCGG CGATATCAGC
CTGTTCAAGA TCATCAGCGA AGGTGGCGTG GCCTCTGGCG TGCGCCGTAT CGAAGCGGTT
ACCGGCGCTG CCGCGCTGGC TTACCTGAAC GCTGCCGAAG AGCAGGTCAA GGAAGCCGCG
CAGCTGATCA AGGGCAACCG TGACAACCTG ATCGACAAGC TGTCGGCTGT GCTCGAGCGC
AACCGTCAGC TGGAGAAGCA GCTGGAACAG CTGCAGGCCA AGGCCGCCAG CGCCGCAGGG
GACGATCTCT CCAGTGCGGC TGTTGAGGTC AAGGGTGCCA AGGTCCTCGC CGCCCGCCTG
GATGGGCAGG ATGGCAAGGC CCTGCTGGCC CTGGTTGATC AGCTGAAGAA CAAGCTCGGC
CACGCAGTGA TCCTGCTGGG CAGCGAGCAT GAGGGCAAGG TCGTGCTGGT GGCCGGCGTG
ACCAAAGACC TCTCCAGCCA ACTCAAGGCT GGTGACCTGA TGAAACAAGC CGCTGCGGCA
GTGGGCGGCA AGGGCGGTGG CCGTCCGGAC ATGGCTCAAG GCGGTGGCGT CGACGTCGCT
GCACTGGACC AGGCCCTGGC GCTGGCCGTG CCGTTCGCAG AGCAGGGACT TTGA
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| Protein sequence | MRPFAVVSST RLPPGAAVSV EEPMKSAEIR EAFLRFFEEQ GHTRVASSSL IPNNDPTLLF
TNAGMNQFKD CFLGAEKRAY TRAVSSQKCV RAGGKHNDLE NVGYTARHHT FFEMLGNFSF
GDYFKRDAIT FAWTFLTSDK WLNLPKEKLW VTVYASDDEA YDIWTKEVGV PAERMVRIGD
NKGAPYASDN FWTMGDTGPC GPCTEIFYDH GADIWGGPPG SPEEDGDRYI EIWNNVFMQF
NRTADGVLHP LPAPSVDTGM GLERISAVMQ HVHSNYEIDL FQNLLSAAAK AIGCSNDGQA
SLKVVADHIR SCGFLIADGV LPSNEGRGYV LRRIIRRACR HGNKLGAKGS FFYQIVAALA
AEMGEAFPEL KSQQAHIERV LKAEEEQFAK TLEQGLRILE QDLAQLKGDV VPGDVVFKLY
DTYGFPMDLT ADIARERELT IDEAGFEREM DAQRERARSA SAFGMDYNSL VKVDTATDFV
GYNATEGQGK VIALYKDGQS VDQLGEGEQG VVVLDRTPFY AESGGQVGDT GYLQSGAVRF
DVQDTTKTGG AFLHHGVVAS GALVIGSPVE AKVDADVQHA TSLNHSATHL LHEALRQVLG
EHVQQKGSLV DSQRLRFDFS HFEAVTPAQI KALEDIVNRE VRKNTPVETE ITDIETAKRK
GAMALFGEKY GDTVRVLSMG GDFSVELCGG IHAKRTGDIS LFKIISEGGV ASGVRRIEAV
TGAAALAYLN AAEEQVKEAA QLIKGNRDNL IDKLSAVLER NRQLEKQLEQ LQAKAASAAG
DDLSSAAVEV KGAKVLAARL DGQDGKALLA LVDQLKNKLG HAVILLGSEH EGKVVLVAGV
TKDLSSQLKA GDLMKQAAAA VGGKGGGRPD MAQGGGVDVA ALDQALALAV PFAEQGL
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